Index and biological spectrum of accessible DNA elements in the human genome
Authors/Creators
- 1. Altius Institute for Biomedical Sciences
Description
Data associated with the manuscript titled
"Index and biological spectrum of accessible DNA elements in the human genome"
https://doi.org/10.1101/822510
Tab-separated file with DNase I Hypersensitive Site (DHS) coordinates,
including DHS summits and core regions and assignments to regulatory components.
A separate legend file describes the contents of each column in more detail.
- DHS_Index_and_Vocabulary_hg38_WM20190703.txt.gz
- DHS_Index_and_Vocabulary_legend.txt
Metadata files describing biosample characteristics and annotations,
provided in HTML, PDF, TSV and Excel formats:
- DHS_Index_and_Vocabulary_metadata.html
- DHS_Index_and_Vocabulary_metadata.pdf
- DHS_Index_and_Vocabulary_metadata.tsv
- DHS_Index_and_Vocabulary_metadata.xlsx
Presence/absence matrix of DHSs (rows) versus biosamples (columns),
provided in RData, MatrixMarket and raw formats:
- dat_bin_FDR01_hg38.RData
- dat_bin_FDR01_hg38.mtx.gz
- dat_bin_FDR01_hg38.txt.gz
The order of DHSs (rows) is the same as in the DHS Index file above,
and the order of biosamples (columns) is the same as in the metadata files.
Files
DHS_Index_and_Vocabulary_legend.txt
Files
(610.3 MB)
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