nipy/nipype: 1.3.0

Esteban, Oscar; Markiewicz, Christopher J.; Jarecka, Dorota; Ziegler, Erik; Johnson, Hans; Burns, Christopher; Manhães-Savio, Alexandre; Hamalainen, Carlo; Notter, Michael Philipp; Yvernault, Benjamin; Ellis, David Gage; Salo, Taylor; Goncalves, Mathias; Jordan, Kesshi; Waskom, Michael; Wong, Jason; Clark, Daniel; Loney, Fred; Dewey, Blake E; Nielson, Dylan M.; Madison, Cindee; Bougacha, Salma; Ćirić , Rastko; Clark, Michael G.; Modat, Marc; Dayan, Michael; Clark, Dav; Keshavan, Anisha; Visconti di Oleggio Castello, Matteo; Pinsard, Basile; Gramfort, Alexandre; Benderoff, Erin; Halchenko, Yaroslav O.; Christian, Horea; Berleant, Shoshana; Joseph, Michael; Guillon, Jérémy; Rokem, Ariel; Koudoro, Serge; Markello, Ross; DuPre, Elizabeth; Kaczmarzyk, Jakub; Moloney, Brendan; Cipollini, Ben; Varoquaux, Gael; Wassermann, Demian; Hanke, Michael; de Hollander, Gilles; Mordom, David; Gillman, Ashley; Buchanan, Colin; Tabas, Alejandro; Tungaraza, Rosalia; Pauli, Wolfgang M.; Sikka, Sharad; Forbes, Jessica; Mancini, Matteo; Iqbal, Shariq; Schwartz, Yannick; Richie-Halford, Adam; Malone, Ian B.; Dubois, Mathieu; Tilley II, Steven; Frohlich, Caroline; Welch, David; Bottenhorn, Katherine; Watanabe, Aimi; Huntenburg, Julia M.; Cumba, Chad; Nichols, B. Nolan; De La Vega, Alejandro; Eshaghi, Arman; Ginsburg, Daniel; Schaefer, Alexander; Kastman, Erik; Heinsfeld, Anibal Sólon; Acland, Benjamin; Liem, Franz; Kent, James; Kleesiek, Jens; Lee, John A.; Erickson, Drew; Giavasis, Steven; Correa, Carlos; Ghayoor, Ali; Küttner, René; Perez-Guevara, Martin Felipe; Millman, Jarrod; Zhou, Dale; Blair, Ross; Haselgrove, Christian; Renfro, Mandy; Liu, Siqi; Kahn, Ari E.; Kim, Sin; Pérez-García, Fernando; Triplett, William; Lampe, Leonie; Kong, Xiang-Zhen; Hallquist, Michael; Sisk, Lucinda M.; Chetverikov, Andrey; Grignard, Martin; Ma, Feilong; Cieslak, Matthew; Chawla, Kshitij; Salvatore, John; Park, Anne; Glatard, Tristan; Poldrack, Russell; Craddock, R. Cameron; Hinds, Oliver; Leinweber, Katrin; Inati, Souheil; Perkins, L. Nathan; Cooper, Gavin; Mattfeld, Aaron; Matsubara, K; Noel, Maxime; Snoek, Lukas; Weninger, Leon; Junhao WEN; Cheung, Brian; Urchs, Sebastian; Stanley, Olivia; Durnez, Joke; Stadler, Jörg; Condamine, Eric; Geisler, Daniel; Floren, Andrew; Gerhard, Stephan; Molina-Romero, Miguel; Haehn, Daniel; Weinstein, Alejandro; Tambini, Arielle; Broderick, William; Rothmei, Simon; Andberg, Sami Kristian; Khanuja, Ranjeet; Bilgel, Murat; Schlamp, Kai; Papadopoulos Orfanos, Dimitri; Tarbert, Claire; Harms, Robbert; Sharp, Paul; Crusoe, Michael R.; Brett, Matthew; Falkiewicz, Marcel; Podranski, Kornelius; Linkersdörfer, Janosch; Flandin, Guillaume; Lerma-Usabiaga, Garikoitz; Ort, Eduard; Shachnev, Dmitry; McNamee, Daniel; Meyers, Benjamin; Van, Andrew; Davison, Andrew; Lai, Jeff; Arias, Jaime; Bielievtsov, Dmytro; Steele, Christopher John; Huang, Lijie; Gonzalez, Ivan; Warner, Joshua; Margulies, Daniel S.; Contier, Oliver; Marina, Ana; Saase, Victor; Nickson, Thomas; Varada, Jan; Schwabacher, Isaac; Pellman, John; Khanuja, Ranjeet; Pannetier, Nicolas; McDermottroe, Conor; Mihai, Paul Glad; Lai, Jeff; Gorgolewski, Krzysztof J.; Ghosh, Satrajit

doi:10.5281/zenodo.3538550

Published November 12, 2019 | Version 1.3.0

Software Open

nipy/nipype: 1.3.0

1. Department of Psychology, Stanford University
2. Stanford University
3. MIT
4. Independent
5. University of Iowa
6. Klinikum rechts der Isar, TUM. ACPySS
7. The Laboratory for Investigative Neurophysiology (The LINE), Department of Radiology and Department of Clinical Neurosciences, Lausanne, Switzerland; Center for Biomedical Imaging (CIBM), Lausanne, Switzerland
8. The University of Iowa
9. Florida International University
10. University of California, San Francisco
11. Shattuck Lab, UCLA Brain Mapping Center
12. Developer
13. Department of Electrical and Computer Engineering, Johns Hopkins University
14. National Institute of Mental Health
15. Molecular Imaging Research Center, CEA, France
16. National Institutes of Health
17. Mayo Clinic, Neurology, Rochester, MN, USA
18. UC Berkeley
19. UC Berkeley - UCSF Graduate Program in Bioengineering
20. Dartmouth College
21. CNRS LTCI, Telecom ParisTech, Université Paris-Saclay
22. Concordia University
23. Dartmouth College: Hanover, NH, United States
24. Institute for Biomedical Engineering, ETH and University of Zurich
25. The Centre for Addiction and Mental Health
26. ARAMIS LAB, Brain and Spine Institute (ICM), Paris, France.
27. The University of Washington eScience Institute
28. Indiana University, IN, USA
29. Montreal Neurological Institute and Hospital
30. UC San Diego
31. INRIA
32. Athena EPI, Inria Sophia-Antipolis
33. Otto-von-Guericke-University Magdeburg, Germany
34. Vrije Universiteit, Amsterdam
35. Australian eHealth Research Centre, Commonwealth Scientific and Industrial Research Organisation; University of Queensland
36. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
37. California Institute of Technology
38. Nathan s Kline institute for psychiatric research
39. University College London
40. Duke University
41. University of Washington
42. Holland Bloorview Kids Rehabilitation Hospital
43. Child Mind Institute
44. Research Group Neuroanatomy and Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
45. SRI International
46. University of Texas at Austin
47. National University Singapore
48. Harvard University - Psychology
49. Washington University in St Louis
50. University of Zurich
51. UniversityHospital Heidelberg, Germany
52. NIMH IRP
53. Neurospin/Unicog/Inserm/CEA
54. The University of Sydney
55. University of Pennsylvania
56. Korea Advanced Institute of Science and Technology
57. MPI CBS Leipzig, Germany
58. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China; Max Planck Institute for Psycholinguistics, Nijmegen, the Netherlands
59. Yale University; New Haven, CT, United States
60. Donders Institute for Brain, Cognition and Behavior, Center for Cognitive Neuroimaging
61. GIGA Institute
62. Department of Neuropsychiatry, University of Pennsylvania
63. INRIA-Saclay, Team Parietal
64. 1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montréal, 3801 University Street, WB-208, H3A 2B4, Québec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.
65. TIB – Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany
66. Boston University
67. University of Newcastle, Australia
68. University of Amsterdam
69. Institute of Imaging & Computer Vision, RWTH Aachen University, Germany
70. Dept of Medical Biophysics, Univeristy of Western Ontario
71. Department of Psychology, Stanford University; Parietal, INRIA
72. Leibniz Institute for Neurobiology
73. CNRS, UMS3552 IRMaGe
74. Technische Universität Dresden, Faculty of Medicine, Department of Child and Adolescent Psychiatry
75. The University of Texas at Austin
76. Institute of Neuroinformatics, ETH/University of Zurich
77. Technical University Munich
78. University of Helsinki
79. National Institute on Aging, Baltimore, MD, USA
80. CEA
81. University of Illinois Urbana Champaign
82. German Institute for International Educational Research
83. Vrije Universiteit Amsterdam
84. University of Cambridge
85. University of Pittsburgh
86. MPI-CBS; McGill University
87. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
88. Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, MA, USA
89. Mayo Clinic
90. Max Planck Research Group for Neuroanatomy & Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
91. Child Mind Institute / Nathan Kline Institute
92. Medical Imaging & Biomarkers, Bioclinica, Newark, CA, USA.
93. MIT, HMS

1.3.0 (November 11, 2019) Full changelog

FIX: Fixed typo in QwarpInputSpec Trait description (https://github.com/nipy/nipype/pull/3079)
FIX: Restore AFNICommand._get_fname, required by some interfaces (https://github.com/nipy/nipype/pull/3071)
FIX: Remove asynchronous chdir callback (https://github.com/nipy/nipype/pull/3060)
FIX: Minimize scope for directory changes while loading results file (https://github.com/nipy/nipype/pull/3061)
ENH: Minimize the number of calls to _load_results when populating inputs (https://github.com/nipy/nipype/pull/3075)
ENH: Refactor savepkl/loadpkl - add a window for loadpkl to wait for the file (https://github.com/nipy/nipype/pull/3089)
ENH: Add "ExportFile" interface as simple alternative to "DataSink" (https://github.com/nipy/nipype/pull/3054)
ENH: Allow nipype.cfg in cwd to be read even if ~/.nipype does not exist (https://github.com/nipy/nipype/pull/3072)
ENH: Add precommit information for contributors and pre-commit style (https://github.com/nipy/nipype/pull/3063)
ENH: Delay etelemetry for non-interactive sessions, report bad versions (https://github.com/nipy/nipype/pull/3049)
ENH: Run memoized check_version at REPL import, Node/Workflow/Interface init (https://github.com/nipy/nipype/pull/30)
RF: Provide functions to augment old Path.mkdir, Path.resolve methods (https://github.com/nipy/nipype/pull/3050)
RF: Redirect nipype.workflows to niflow.nipype1.workflows (https://github.com/nipy/nipype/pull/3067)
TST: Skip dcm2niix test if data fails to download (https://github.com/nipy/nipype/pull/3059)
TST: dcm2niix test fix (https://github.com/nipy/nipype/pull/3058)
MAINT: Drop Python 3.4 support (https://github.com/nipy/nipype/pull/3062)
CI: make specs on Travis (https://github.com/nipy/nipype/pull/3066)

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nipy/nipype: 1.3.0

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