Dataset Open Access
2D bright field yeast cell images with ground truth annotations
Zhang, Chong; Huber, Florian; Michael Knop; Fred Hamprecht
Dataset used to evaluate the method described in "Yeast cell detection and segmentation in bright field microscopy", ISBI 2014 (DOI: 10.1109/ISBI.2014.6868107).
Here, we provide the ground truth labels of: cell centers and segmentation, which are used in the publications:
- "Learning to Segment: Training Hierarchical Segmentation under a Topological Loss", MICCAI 2015. (DOI: 10.1007/978-3-319-24574-4_32)
- "Hierarchical Planar Correlation Clustering for Cell Segmentation", EMMCVPR 2015. (DOI: 10.1007/978-3-319-14612-6_36)
- "Cell Detection and Segmentation Using Correlation Clustering", MICCAI 2014. (DOI: 10.1007/978-3-319-10404-1_2)
Files
(25.3 MB)
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DS01_11.tif
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DS01_12.tif
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DS01_13_gt.tif
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DS01_15.tif
md5:71da0f8bb0bf5179c4dee74f1bbd582a |
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DS01_15_gt.tif
md5:1dacd5f78e59ff68c3970b86d0b60b1b |
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lmk_centers_01.txt
md5:9e8bce75eb7636dcb1f3e918cce0dc5d |
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lmk_centers_02.txt
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lmk_centers_03.txt
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lmk_centers_04.txt
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lmk_centers_05.txt
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lmk_centers_06.txt
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lmk_centers_07.txt
md5:6630cfcc54d64f6029cfe2302e0a4257 |
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lmk_centers_08.txt
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lmk_centers_09.txt
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lmk_centers_10.txt
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lmk_centers_11.txt
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lmk_centers_12.txt
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lmk_centers_13.txt
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lmk_centers_14.txt
md5:9a4909c129621a1b0887f43d815e53c2 |
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lmk_centers_15.txt
md5:476f44f91c2caab52be7addd69314337 |
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downloads
| All versions | This version | |
|---|---|---|
| Views | 509 | 509 |
| Downloads | 892 | 892 |
| Data volume | 555.6 MB | 555.6 MB |
| Unique views | 471 | 471 |
| Unique downloads | 86 | 86 |
Indexed in
- Publication date:
- March 1, 2017
- DOI:
-
- Communities:
- License (for files):
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International