Dataset Open Access

2D bright field yeast cell images with ground truth annotations

Zhang, Chong; Huber, Florian; Michael Knop; Fred Hamprecht

Dataset used to evaluate the method described in "Yeast cell detection and segmentation in bright field microscopy", ISBI 2014 (DOI: 10.1109/ISBI.2014.6868107).

Here, we provide the ground truth labels of: cell centers and segmentation, which are used in the publications:

  • "Learning to Segment: Training Hierarchical Segmentation under a Topological Loss", MICCAI 2015. (DOI: 10.1007/978-3-319-24574-4_32)
  • "Hierarchical Planar Correlation Clustering for Cell Segmentation", EMMCVPR 2015. (DOI: 10.1007/978-3-319-14612-6_36)
  • "Cell Detection and Segmentation Using Correlation Clustering", MICCAI 2014. (DOI: 10.1007/978-3-319-10404-1_2)

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DS01_15_gt.tif
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lmk_centers_01.txt
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lmk_centers_02.txt
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lmk_centers_03.txt
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lmk_centers_04.txt
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lmk_centers_05.txt
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lmk_centers_07.txt
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lmk_centers_08.txt
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lmk_centers_09.txt
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lmk_centers_10.txt
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lmk_centers_11.txt
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lmk_centers_12.txt
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lmk_centers_13.txt
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lmk_centers_15.txt
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