Published September 19, 2019
| Version 1.0.0
Dataset
Open
Genome rearrangement control data for dnarrange
Authors/Creators
- 1. Yokohama City University
- 2. AIST & The University of Tokyo
Description
These files contain information on genome sequence rearrangements. They can be used as controls, to find rearrangements specific to other human datasets, with dnarrange: https://github.com/mcfrith/dnarrange
- hg38-NA12878-Min.txt.gz: from human female DNA NA12878, sequenced by MinION (Jain et al. Nat. Biotechnol. 2018 36:338-345, rel_3_4).
- hg38-NA19240-Pro.txt.gz: from human female DNA NA19240, sequenced by PromethION (De Coster et al. Genome Res. 2019 29:1178-1187, ERR258112-5).
- hg38-NA24385-CLR.txt.gz: from human male DNA NA24385, sequenced by PacBio Sequel (AM Wenger et al. Nat. Biotechnol. 2019, SRR9972588).
- hg38-panTro6.txt.gz: from chimpanzee male genome Clint_PTRv2/panTro6 (Kronenberg et al. Science 2018 360:eaar6343).
Files
Files
(330.7 MB)
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md5:3f5fe395629d99e3b4b47bcbe9b7dcbe
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md5:2e5829b1aafaef6efb017a7b7b0258d4
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md5:1582655be970c53458646a10d3a71d75
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77.2 MB | Download |
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md5:7e2610ae87aaa0c80317f70ca26f1127
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905.9 kB | Download |