Dataset Open Access

A comparison of automatic cell identification methods for single-cell RNA-sequencing data

Tamim Abdelaal; Lieke Michielsen; Davy Cats; Dylan Hoogduin; Hailiang Mei; Marcel Reinders; Ahmed Mahfouz

Benchmark datasets used to evaluate the performance of 22 classifiers for cell type classification for scRNA-seq data

Files (3.7 GB)
Name Size
scRNAseq_Benchmark_datasets.zip
md5:b799a660b8bcaf5f3580a9b6f9372e5b 		3.7 GB Download
200
50
views
downloads
All versions This version
Views 20055
Downloads 5015
Data volume 77.9 GB55.1 GB
Unique views 16443
Unique downloads 4914
More info on how stats are collected.
Indexed in
Publication date:
August 1, 2019
DOI:
10.5281/zenodo.3357167

Zenodo DOI Badge

DOI 

10.5281/zenodo.3357167

Markdown 

[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.3357167.svg)](https://doi.org/10.5281/zenodo.3357167)

reStructedText 

.. image:: https://zenodo.org/badge/DOI/10.5281/zenodo.3357167.svg
   :target: https://doi.org/10.5281/zenodo.3357167

HTML 

<a href="https://doi.org/10.5281/zenodo.3357167"><img src="https://zenodo.org/badge/DOI/10.5281/zenodo.3357167.svg" alt="DOI"></a>

Image URL 

https://zenodo.org/badge/DOI/10.5281/zenodo.3357167.svg

Target URL 

https://doi.org/10.5281/zenodo.3357167

Keyword(s):
scRNA-seq Benchmark Classification Cell identity
Grants:
European Commission:
  • ISPIC - Image-Guided Surgery (IGS) and Personalised Postoperative Immunotherapy To Improving Cancer Outcome (675743)
License (for files):
Creative Commons Attribution 4.0 International

Versions

Version 2 10.5281/zenodo.3357167 Aug 1, 2019
Version 1 10.5281/zenodo.2877646 May 18, 2019
Cite all versions? You can cite all versions by using the DOI 10.5281/zenodo.2877645. This DOI represents all versions, and will always resolve to the latest one. Read more.

Share

Cite as

Export