Inferelator Saccharomyces Cerevisiae Single-Cell Data Set

This data is associated with the Inferelator package. It has an expression data set (103118_SS_Data.tsv.gz), which is a [Cells x Genes] TSV file which has 5 included metadata columns [Genotype, Genotype_Group, Replicate, Condition, tenXBarcode]. It also contains a prior data matrix generated from the YEASTRACT database (YEASTRACT_Both_20181118.tsv), a gold standard derived from the YEASTRACT database (gold_standard.tsv), a list of transcription factors (tf_names_restrict.tsv), and a list of protein-coding genes (orfs.tsv). It was initially used in Jackson, C.A., Castro, D.M., Saldi, G.-A., Bonneau, R., and Gresham, D. (2019). Gene regulatory network reconstruction using single-cell RNA sequencing of barcoded genotypes in diverse environments. BioRxiv 581678.