Published August 15, 2018
| Version v0.6
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Training material for single-cell RNA-seq data analysis (Galaxy Training Network tutorial)
Description
The data provided here is part of the Galaxy Training Network tutorial that analyses single-cell RNA-seq data (scRNA) using cell barcodes and data from Freiburg MPI Grün Lab. This dataset (GEO Accession: GSM2668223) consists of paired-end data from the bone marrow of a 5-week old male C57 mouse, with a downsampled subset to facilitate ease-of-processing during live demonstration.
The Plate/Batch datasets were generated by simulated cells using R scripts elucidated in the simulatingcontamination.html file.
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