Published June 18, 2019 | Version v1

Multivariate mixed model application to mass cytometry data (processed data)

Authors/Creators

  • 1. Maastricht University

Description

This bachelor thesis demonstrates the results of mass cytometry data re-analysis using multivariate regression. I reanalyse a dataset by Palgen et al. (2019) using two models: a Poisson log-normal mixed model and a logistic linear mixed model from the R package ‘cytoeffect’ (Seiler et al., 2019). By exposing multivariate patterns and the associated uncertainty profiles in the data, the aim of this analysis is to replicate biological conclusions and uncover new biological findings. 

Notes

The code used to produce this is entirely reproducible and may be found on Github "https://github.com/lucyquirant/capstone_Palgen_reanalysis.git"

Files

Files (1.1 GB)

Name Size
md5:bcc7aa2ab8b5d11b625daf8e5e440fc5
109.3 MB Download
md5:25f3e81aa768bf7a3b64c6186ba823fe
103.4 MB Download
md5:4b7d670f50da82912493652759efe0d1
500.9 MB Download
md5:01d4432555d7a4adf0805536438bbcf7
341.0 MB Download