Published June 17, 2019
| Version v1
Dataset
Open
Simulation POPC_512_TM4_10_5up_5down_NaCl_150mM_310K membrane
Authors/Creators
- 1. Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
Description
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino Acid Transporter Interaction
Year publication: 2018
DOI publication: 10.1021/acscentsci.7b00582
Description: Simulation POPC membrane containing ten LAPTM4B-TM4 peptides and 9 ceramide (CER160) originally in the water phase using charmm36 at 310K.
MD engine: gromacs 5.1.2
Force field: charmm36
Temperature: 310 K
Pressure: 1 bar
Simulation time: 4190 ns
Saving frequency: 100 ps
Molecular content:
TM4 10
POPC 512
SOL 20470
NA 55
CL 65
Additional information:
* Membrane containing LAPTM4B TM4 peptides (Ac-CLVLIILLFISIILTFKGYLISCVWNC-NH2).
Files
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