Published November 30, 2015
| Version v1
Dataset
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CTCF loop analysis and prediction scripts and datasets
Description
Additional files accompanying the study of experimental and predicted CTCF loops in human cell lines by Oti et al.
ctcfloopscripts_v1.0.zip: Scripts used in the analysis of CTCF-mediated loops in human cell lines; both experimental ChIA-PET loops as well as predicted loops based on ChIP-seq data. Zipped file.
ctcf_predictedloops_ENCODE_chipseq_datasets.tar.gz: Predicted CTCF loops for 100 ENCODE ChIP-seq datasets. Gzipped tar file.
fimo_ctcfmotifs_MA0139_hg19_2.5e-4.bed.gz: genome-wide CTCF motifs in human genome (hg19) detected by FIMO tool.
Files
ctcfloopscripts_v1.0.zip
Files
(214.0 MB)
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