nipy/nipype: 1.2.0

Gorgolewski, Krzysztof J.; Esteban, Oscar; Markiewicz, Christopher J.; Ziegler, Erik; Ellis, David Gage; Jarecka, Dorota; Notter, Michael Philipp; Johnson, Hans; Burns, Christopher; Manhães-Savio, Alexandre; Hamalainen, Carlo; Yvernault, Benjamin; Salo, Taylor; Goncalves, Mathias; Jordan, Kesshi; Waskom, Michael; Wong, Jason; Modat, Marc; Loney, Fred; Clark, Daniel; Dewey, Blake E; Nielson, Dylan M.; Madison, Cindee; Bougacha, Salma; Ćirić , Rastko; Clark, Michael G.; Dayan, Michael; Clark, Dav; Visconti di Oleggio Castello, Matteo; Keshavan, Anisha; Pinsard, Basile; Gramfort, Alexandre; Berleant, Shoshana; Christian, Horea; Halchenko, Yaroslav O.; Cipollini, Ben; Guillon, Jérémy; Markello, Ross; Rokem, Ariel; Koudoro, Serge; DuPre, Elizabeth; Kaczmarzyk, Jakub; Moloney, Brendan; Varoquaux, Gael; Joseph, Michael; Wassermann, Demian; Hanke, Michael; de Hollander, Gilles; Mordom, David; Gillman, Ashley; Buchanan, Colin; Tabas, Alejandro; Tungaraza, Rosalia; Pauli, Wolfgang M.; Sikka, Sharad; Mancini, Matteo; Forbes, Jessica; Iqbal, Shariq; Schwartz, Yannick; Richie-Halford, Adam; Malone, Ian B.; Dubois, Mathieu; Heinsfeld, Anibal Sólon; Frohlich, Caroline; Welch, David; Bottenhorn, Katherine; Kent, James; De La Vega, Alejandro; Watanabe, Aimi; Huntenburg, Julia M.; Cumba, Chad; Nichols, B. Nolan; Eshaghi, Arman; Ginsburg, Daniel; Schaefer, Alexander; Kastman, Erik; Acland, Benjamin; Liem, Franz; Kleesiek, Jens; Erickson, Drew; Giavasis, Steven; Correa, Carlos; Ghayoor, Ali; Contier, Oliver; Küttner, René; Millman, Jarrod; Lai, Jeff; Zhou, Dale; Blair, Ross; Haselgrove, Christian; Glatard, Tristan; Renfro, Mandy; Liu, Siqi; Stadler, Jörg; Kahn, Ari E.; Pérez-García, Fernando; Triplett, William; Lampe, Leonie; Kong, Xiang-Zhen; Hallquist, Michael; Leinweber, Katrin; Chetverikov, Andrey; Grignard, Martin; Ma, Feilong; Chawla, Kshitij; Salvatore, John; Park, Anne; Poldrack, Russell; Craddock, R. Cameron; Hinds, Oliver; Cooper, Gavin; Weninger, Leon; Inati, Souheil; Perkins, L. Nathan; Lukas Snoek; Marina, Ana; Mattfeld, Aaron; Matsubara, K; Noel, Maxime; Cheung, Brian; Urchs, Sebastian; Durnez, Joke; Condamine, Eric; Geisler, Daniel; Floren, Andrew; Gerhard, Stephan; Sharp, Paul; Molina-Romero, Miguel; Haehn, Daniel; Weinstein, Alejandro; Tambini, Arielle; Broderick, William; Saase, Victor; Rothmei, Simon; Andberg, Sami Kristian; Harms, Robbert; Khanuja, Ranjeet; Schlamp, Kai; Arias, Jaime; Papadopoulos Orfanos, Dimitri; Tarbert, Claire; Nickson, Thomas; Crusoe, Michael R.; Brett, Matthew; Falkiewicz, Marcel; Podranski, Kornelius; Linkersdörfer, Janosch; Flandin, Guillaume; Ort, Eduard; Shachnev, Dmitry; McNamee, Daniel; Davison, Andrew; Varada, Jan; Schwabacher, Isaac; Pellman, John; Perez-Guevara, Martin; Khanuja, Ranjeet; Pannetier, Nicolas; McDermottroe, Conor; Mihai, Paul Glad; Ghosh, Satrajit

doi:10.5281/zenodo.2685428

Published May 9, 2019 | Version 1.2.0

Software Open

nipy/nipype: 1.2.0

1. Department of Psychology, Stanford University
2. Stanford University
3. Independent
4. The University of Iowa
5. MIT
6. The Laboratory for Investigative Neurophysiology (The LINE), Department of Radiology and Department of Clinical Neurosciences, Lausanne, Switzerland; Center for Biomedical Imaging (CIBM), Lausanne, Switzerland
7. University of Iowa
8. Klinikum rechts der Isar, TUM. ACPySS
9. Florida International University
10. University of California, San Francisco
11. Shattuck Lab, UCLA Brain Mapping Center
12. Developer
13. Department of Electrical and Computer Engineering, Johns Hopkins University
14. National Institute of Mental Health
15. Molecular Imaging Research Center, CEA, France
16. National Institutes of Health
17. Mayo Clinic, Neurology, Rochester, MN, USA
18. UC Berkeley
19. Dartmouth College
20. UC Berkeley - UCSF Graduate Program in Bioengineering
21. CNRS LTCI, Telecom ParisTech, Université Paris-Saclay
22. Institute for Biomedical Engineering, ETH and University of Zurich
23. Dartmouth College: Hanover, NH, United States
24. UC San Diego
25. ARAMIS LAB, Brain and Spine Institute (ICM), Paris, France.
26. Montreal Neurological Institute and Hospital
27. The University of Washington eScience Institute
28. Indiana University, IN, USA
29. INRIA
30. The Centre for Addiction and Mental Health
31. Athena EPI, Inria Sophia-Antipolis
32. Otto-von-Guericke-University Magdeburg, Germany
33. Vrije Universiteit, Amsterdam
34. Australian eHealth Research Centre, Commonwealth Scientific and Industrial Research Organisation; University of Queensland
35. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
36. California Institute of Technology
37. Nathan s Kline institute for psychiatric research
38. University College London
39. Duke University
40. University of Washington
41. Child Mind Institute
42. University of Texas at Austin
43. Research Group Neuroanatomy and Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
44. SRI International
45. National University Singapore
46. Harvard University - Psychology
47. Washington University in St Louis
48. University of Zurich
49. UniversityHospital Heidelberg, Germany
50. 1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montréal, 3801 University Street, WB-208, H3A 2B4, Québec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.
51. The University of Sydney
52. Leibniz Institute for Neurobiology
53. University of Pennsylvania
54. MPI CBS Leipzig, Germany
55. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China; Max Planck Institute for Psycholinguistics, Nijmegen, the Netherlands
56. TIB – Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany
57. Donders Institute for Brain, Cognition and Behavior, Center for Cognitive Neuroimaging
58. GIGA Institute
59. INRIA-Saclay, Team Parietal
60. University of Newcastle, Australia
61. Institute of Imaging & Computer Vision, RWTH Aachen University, Germany
62. Boston University
63. University of Amsterdam
64. Department of Psychology, Stanford University; Parietal, INRIA
65. CNRS, UMS3552 IRMaGe
66. Technische Universität Dresden, Faculty of Medicine, Department of Child and Adolescent Psychiatry
67. The University of Texas at Austin
68. Institute of Neuroinformatics, ETH/University of Zurich
69. University of Illinois Urbana Champaign
70. Technical University Munich
71. University of Helsinki
72. CEA
73. German Institute for International Educational Research
74. Vrije Universiteit Amsterdam
75. University of Cambridge
76. Child Mind Institute / Nathan Kline Institute
77. Medical Imaging & Biomarkers, Bioclinica, Newark, CA, USA.
78. MIT, HMS

1.2.0 (May 09, 2019) Full changelog

FIX: Parsing of filename in AlignEpiAnatPy when filename does not have + (https://github.com/nipy/nipype/pull/2909)
FIX: Import nibabel reorientation bug fix (https://github.com/nipy/nipype/pull/2912)
FIX: Update FNIRT outputs for warped_file log_file to include cwd (https://github.com/nipy/nipype/pull/2900)
FIX: Sort conditions in bids_gen_info to ensure consistent order (https://github.com/nipy/nipype/pull/2867)
FIX: Some traits-5.0.0 don't work with Python 2.7 (https://github.com/nipy/nipype/pull/1)
ENH: CompCor enhancement (https://github.com/nipy/nipype/pull/2878)
ENH: Do not override caught exceptions with FileNotFoundError from unfinished hashfile (https://github.com/nipy/nipype/pull/2919)
ENH: More verbose description when a faulty results file is loaded (https://github.com/nipy/nipype/pull/2920)
ENH: Add all DIPY workflows dynamically (https://github.com/nipy/nipype/pull/2905)
ENH: Add mrdegibbs and dwibiascorrect from mrtrix3 (https://github.com/nipy/nipype/pull/2904)
TEST: Fix CI builds (https://github.com/nipy/nipype/pull/2927)
MAINT: Reduce deprecation warnings (https://github.com/nipy/nipype/pull/2903)

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nipy/nipype: 1.2.0

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