Published May 2, 2019
| Version v1
Dataset
Open
GTDB and RefSeq-RDP databases parsed for species assignment
Description
GTDB and RefSeq-RDP databases parsed for the addSpecies() dada2 function. Both databases were parsed with `parsing_DB_dada2_spp_assign.py` python script using as input both databases downloaded at: https://zenodo.org/record/2541239#.XM2UgCOZPOQ. The python script and a detailed description explaining the code and databases versions can be found at: https://github.com/antonioggsousa/GTDB-RefSeq-RDP-assign-spp-dada2
Files
Files
(8.5 MB)
Name | Size | Download all |
---|---|---|
md5:e94d907d0b0b13afc183fdb151cca8de
|
4.8 MB | Download |
md5:b499d7a4ee70990256e2e9a1fcb735bd
|
3.8 MB | Download |