Published May 2, 2019 | Version v1
Dataset Open

GTDB and RefSeq-RDP databases parsed for species assignment

Authors/Creators

  • 1. CIIMAR-UP

Contributors

Contact person:

  • 1. CIIMAR-UP

Description

GTDB and RefSeq-RDP databases parsed for the addSpecies() dada2 function. Both databases were parsed with `parsing_DB_dada2_spp_assign.py` python script using as input both databases downloaded at: https://zenodo.org/record/2541239#.XM2UgCOZPOQ. The python script and a detailed description explaining the code and databases versions can be found at: https://github.com/antonioggsousa/GTDB-RefSeq-RDP-assign-spp-dada2

 

Files

Files (8.5 MB)

Name Size
md5:e94d907d0b0b13afc183fdb151cca8de
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md5:b499d7a4ee70990256e2e9a1fcb735bd
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