Dataset Open Access

Historical contingency shapes adaptive radiation in Antarctic fishes [Data set]

Daane, Jacob M; Dornburg, Alex; Smits, Patrick; MacGuigan, Daniel; Hawkins, M Brent; Near, Thomas J; Detrich, H William III; Harris, Matthew P

Assembled reference contigs for protein-coding exons and conserved non-coding regions from targeted sequence enrichment of notothenioid fishes and outgroups. 

Published in : Daane, JM, Dornburg, A, Smits, P, MacGuigan, D, Hawkins, B, Near, TJ, Detrich, HW III*, Harris MP*. (2019).  Historical contingency shapes adaptive radiation in Antarctic fishes.  Nature Ecology & Evolution.

 

-contigs.zip contains the assembled contigs for each species. Each contig represents a targeted region with the addition of flanking DNA sequence

-cnes.zip contains the targeted conserved non-coding regions isolated from the larger contigs in contigs.zip

-exons.zip contains the targeted protein coding exons isolated from the larger contigs in contigs.zip

-protein.zip contains the translated protein coding exons from exons.zip

Files (2.2 GB)
Name Size
cnes.zip
md5:4a830a3e41cd2537ba99d38478ee987c 		115.6 MB Download
contigs.gtf
md5:4f3e85d71b047bd8d5f5514f689c7361 		51.3 MB Download
contigs.zip
md5:911a61eda0979e160ba43a86747e3a67 		1.2 GB Download
exons.zip
md5:869e4f8e6a956e62e151c45f57806c03 		489.9 MB Download
protein.zip
md5:eda80d14e07d9ae76cc5502c5e55b9c7 		341.1 MB Download

  • Daane, JM, Dornburg, A, Smits, P, MacGuigan, D, Hawkins, B, Near, TJ, Detrich, HW III*, Harris MP*. (2019).  Historical contingency shapes adaptive radiation in Antarctic fishes.  Nature Ecology & Evolution. in press.

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Publication date:
April 9, 2019
DOI:
10.5281/zenodo.2628936

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Published in:
Nature Ecology & Evolution:.
Grants:
National Science Foundation:
  • Antarctic Notothenioid Fishes: Sentinel Taxa for Southern Ocean Warming (1444167)
License (for files):
Creative Commons Attribution 4.0 International

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Version 1.0 10.5281/zenodo.2628936 Apr 9, 2019
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