Supplementary data files for Manzano-Marín 2020 "No evidence for Wolbachia as a nutritional co-obligate endosymbiont in the aphid Pentalonia nigronervosa"

Supplementary data for Manzano-Marín 2019 "No evidence for Wolbachia as a nutritional co-obligate endosymbiont in the aphid Pentalonia nigronervosa".

The data in "supplementary_data.tar.gz" consists of six folders:

1) "Buchnera_GenBank_annotation”: GenBank-formatted file of the annotated genes of Buchnera from Pentalonia nigronervosa (BPn).

2) "Buchnera_gene_BLAST_search”: Tabular BLAST output files and FASTA-formatted files of the identified Buchnera Bpn genes.

3) "P_nigronervosa_blastx_binning”: Tabular BLAST output files and FASTA-formatted files of the Buchnera, Wolbachia, and mitochondrion bins.

4) "P_nigronervosa_BOWTIE_map_vs_bins": BAM-formatted alignment files for read libraries vs. Buchnera and Wolbachia bins from Pentalonia nigronervosa.

5) "P_nigronervosa_BOWTIE_map_vs_genes": BAM-formatted alignment files for read libraries vs. genes from Buchnera and Wolbachia bin from Pentalonia nigronervosa.

6) "P_nigronervosa_SPAdes_assembly": Output files for pooled SPAdes assembly.

Also, the filtered and trimmed FASTQ files used for genome assembly can be found in the comrpessed file "read_files_clean.tar.gz".