nipy/nipype: 1.1.9

Gorgolewski, Krzysztof J.; Esteban, Oscar; Markiewicz, Christopher J.; Ziegler, Erik; Ellis, David Gage; Jarecka, Dorota; Notter, Michael Philipp; Johnson, Hans; Burns, Christopher; Manhães-Savio, Alexandre; Hamalainen, Carlo; Yvernault, Benjamin; Salo, Taylor; Goncalves, Mathias; Jordan, Kesshi; Waskom, Michael; Wong, Jason; Modat, Marc; Loney, Fred; Clark, Daniel; Nielson, Dylan M.; Dewey, Blake E; Madison, Cindee; Bougacha, Salma; Clark, Michael G.; Dayan, Michael; Visconti di Oleggio Castello, Matteo; Clark, Dav; Keshavan, Anisha; Pinsard, Basile; Gramfort, Alexandre; Berleant, Shoshana; Halchenko, Yaroslav O.; Christian, Horea; Cipollini, Ben; Guillon, Jérémy; Markello, Ross; Rokem, Ariel; DuPre, Elizabeth; Kaczmarzyk, Jakub; Moloney, Brendan; Varoquaux, Gael; Wassermann, Demian; Hanke, Michael; de Hollander, Gilles; Mordom, David; Gillman, Ashley; Buchanan, Colin; Tabas, Alejandro; Tungaraza, Rosalia; Pauli, Wolfgang M.; Sikka, Sharad; Mancini, Matteo; Forbes, Jessica; Iqbal, Shariq; Richie-Halford, Adam; Schwartz, Yannick; Malone, Ian B.; Dubois, Mathieu; Heinsfeld, Anibal Sólon; Frohlich, Caroline; Welch, David; Bottenhorn, Katherine; Kent, James; De La Vega, Alejandro; Watanabe, Aimi; Huntenburg, Julia M.; Cumba, Chad; Nichols, B. Nolan; Eshaghi, Arman; Ginsburg, Daniel; Schaefer, Alexander; Kastman, Erik; Acland, Benjamin; Liem, Franz; Kleesiek, Jens; Erickson, Drew; Giavasis, Steven; Correa, Carlos; Ghayoor, Ali; Contier, Oliver; Küttner, René; Millman, Jarrod; Lai, Jeff; Zhou, Dale; Blair, Ross; Haselgrove, Christian; Glatard, Tristan; Renfro, Mandy; Liu, Siqi; Stadler, Jörg; Kahn, Ari E.; Pérez-García, Fernando; Triplett, William; Lampe, Leonie; Kong, Xiang-Zhen; Hallquist, Michael; Ma, Feilong; Leinweber, Katrin; Chetverikov, Andrey; Grignard, Martin; Chawla, Kshitij; Salvatore, John; Park, Anne; Poldrack, Russell; Craddock, R. Cameron; Hinds, Oliver; Cooper, Gavin; Weninger, Leon; Inati, Souheil; Perkins, L. Nathan; Lukas Snoek; Marina, Ana; Mattfeld, Aaron; Matsubara, K; Noel, Maxime; Cheung, Brian; Urchs, Sebastian; Durnez, Joke; Condamine, Eric; Geisler, Daniel; Floren, Andrew; Gerhard, Stephan; Sharp, Paul; Molina-Romero, Miguel; Haehn, Daniel; Weinstein, Alejandro; Tambini, Arielle; Broderick, William; Saase, Victor; Rothmei, Simon; Andberg, Sami Kristian; Harms, Robbert; Khanuja, Ranjeet; Schlamp, Kai; Arias, Jaime; Papadopoulos Orfanos, Dimitri; Tarbert, Claire; Nickson, Thomas; Brett, Matthew; Falkiewicz, Marcel; Podranski, Kornelius; Linkersdörfer, Janosch; Flandin, Guillaume; Ort, Eduard; Shachnev, Dmitry; McNamee, Daniel; Davison, Andrew; Varada, Jan; Schwabacher, Isaac; Pellman, John; Perez-Guevara, Martin; Khanuja, Ranjeet; Pannetier, Nicolas; McDermottroe, Conor; Mihai, Paul Glad; Ghosh, Satrajit

doi:10.5281/zenodo.2577511

Published February 25, 2019 | Version 1.1.9

Software Open

nipy/nipype: 1.1.9

1. Department of Psychology, Stanford University
2. Stanford University
3. Independent
4. The University of Iowa
5. MIT
6. The Laboratory for Investigative Neurophysiology (The LINE), Department of Radiology and Department of Clinical Neurosciences, Lausanne, Switzerland; Center for Biomedical Imaging (CIBM), Lausanne, Switzerland
7. University of Iowa
8. Klinikum rechts der Isar, TUM. ACPySS
9. Florida International University
10. University of California, San Francisco
11. Shattuck Lab, UCLA Brain Mapping Center
12. Developer
13. National Institute of Mental Health
14. Department of Electrical and Computer Engineering, Johns Hopkins University
15. Molecular Imaging Research Center, CEA, France
16. National Institutes of Health
17. Mayo Clinic, Neurology, Rochester, MN, USA
18. Dartmouth College
19. UC Berkeley
20. UC Berkeley - UCSF Graduate Program in Bioengineering
21. CNRS LTCI, Telecom ParisTech, Université Paris-Saclay
22. Dartmouth College: Hanover, NH, United States
23. Institute for Biomedical Engineering, ETH and University of Zurich
24. UC San Diego
25. ARAMIS LAB, Brain and Spine Institute (ICM), Paris, France.
26. Montreal Neurological Institute and Hospital
27. The University of Washington eScience Institute
28. INRIA
29. Athena EPI, Inria Sophia-Antipolis
30. Otto-von-Guericke-University Magdeburg, Germany
31. Vrije Universiteit, Amsterdam
32. Australian eHealth Research Centre, Commonwealth Scientific and Industrial Research Organisation; University of Queensland
33. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
34. California Institute of Technology
35. Nathan s Kline institute for psychiatric research
36. University College London
37. Duke University
38. University of Washington
39. Child Mind Institute
40. University of Texas at Austin
41. Research Group Neuroanatomy and Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
42. SRI International
43. National University Singapore
44. Harvard University - Psychology
45. Washington University in St Louis
46. University of Zurich
47. UniversityHospital Heidelberg, Germany
48. 1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montréal, 3801 University Street, WB-208, H3A 2B4, Québec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.
49. The University of Sydney
50. Leibniz Institute for Neurobiology
51. University of Pennsylvania
52. MPI CBS Leipzig, Germany
53. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China; Max Planck Institute for Psycholinguistics, Nijmegen, the Netherlands
54. TIB – Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany
55. Donders Institute for Brain, Cognition and Behavior, Center for Cognitive Neuroimaging
56. GIGA Institute
57. INRIA-Saclay, Team Parietal
58. University of Newcastle, Australia
59. Institute of Imaging & Computer Vision, RWTH Aachen University, Germany
60. Boston University
61. University of Amsterdam
62. Department of Psychology, Stanford University; Parietal, INRIA
63. CNRS, UMS3552 IRMaGe
64. Technische Universität Dresden, Faculty of Medicine, Department of Child and Adolescent Psychiatry
65. The University of Texas at Austin
66. Institute of Neuroinformatics, ETH/University of Zurich
67. University of Illinois Urbana Champaign
68. Technical University Munich
69. University of Helsinki
70. CEA
71. German Institute for International Educational Research
72. Vrije Universiteit Amsterdam
73. University of Cambridge
74. Child Mind Institute / Nathan Kline Institute
75. Medical Imaging & Biomarkers, Bioclinica, Newark, CA, USA.
76. MIT, HMS

1.1.9 (February 25, 2019) Full changelog

FIX: Make positional arguments to LaplacianThickness require previous argument (https://github.com/nipy/nipype/pull/2848)
FIX: Import math and csv modules for bids_gen_info (https://github.com/nipy/nipype/pull/2881)
FIX: Ensure outputs can be listed in camino.ProcStreamlines by defining instance variable (https://github.com/nipy/nipype/pull/2739)
ENH: Allow afni.MaskTool to take multiple input files (https://github.com/nipy/nipype/pull/2892)
ENH: Add flags dictionary input to spm.Level1Design (https://github.com/nipy/nipype/pull/2861)
ENH: Threshold stddev once only in TSNR (https://github.com/nipy/nipype/pull/2883)
ENH: Add workbench.CiftiSmooth interface (https://github.com/nipy/nipype/pull/2871)
DOC: Replace initialism typo in comment with intended phrase (https://github.com/nipy/nipype/pull/2875)
DOC: Fix typos in ANTs Registration input documentation (https://github.com/nipy/nipype/pull/2869)

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nipy/nipype: 1.1.9

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