igsr/igsr_analysis: First release of code

This software is relevant for the analysis (Mapping, BAM qc, Variant Calling, Filtering etc...) of IGSR data

The International Genome Sample Resource (IGSR) is a project funded by the Wellcome Trust created after the finalization of the 1000 Genomes Project in order to maintain and expand the resource. It has the following aims:

• Ensure the future access to and usability of the 1000 Genomes reference data
• Incorporate additional published genomic data on the 1000 Genomes samples
• Expand the data collection to include new populations not represented in the 1000 Genomes Project

This repository contains code used in the different analyses pipelines that we use in the project. To use this code please follow the steps described below

The International Genome Sample Resource (IGSR) is a project funded by the Wellcome Trust created after the finalization of the 1000 Genomes Project in order to maintain and expand the resource. It has the following aims:

• Ensure the future access to and usability of the 1000 Genomes reference data
• Incorporate additional published genomic data on the 1000 Genomes samples
• Expand the data collection to include new populations not represented in the 1000 Genomes Project

This release contains code used in the different analyses pipelines that we use in the project. To use this code please follow the steps described below