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ropensci/RNeXML: RNeXML v2.3.0

Carl Boettiger; Hilmar Lapp; Rutger Vos; Scott Chamberlain; Kseniia Shumelchyk; Craig Citro; steven2249; Check your git settings!; François Michonneau; Edmund Hart; Bryce Mecum

An extensive and rapidly growing collection of richly annotated phylogenetics data is now available in the NeXML format. NeXML relies on state-of-the-art data exchange technology to provide a format that can be both validated and extended, providing a data quality assurance and adaptability to the future that is lacking in other formats. See Vos et al 2012 for further details on the NeXML format.

Release Notes

This release addresses several aspects improving the handling of metadata:

  • add_meta() now works for trees and characters (#213, PR #217)
  • Handles nested meta elements properly (#196, PR #197)

Misc fixes:

  • enable handling of rootEdge (#207, PR #218)
  • Replaces taxize backend with faster alternative taxadb method. (#224, PR #226). This remains only a suggested package and has much lighter dependencies as well.
  • add hex

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Publication date:
January 26, 2019
DOI:
10.5281/zenodo.2549858

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Versions

Version v2.3.0 10.5281/zenodo.2549858 Jan 26, 2019
Version v2.2.0 10.5281/zenodo.1477503 Nov 4, 2018
Version v2.1.0 10.5281/zenodo.1241475 May 5, 2018
Version 2.0.8 10.5281/zenodo.1054559 Nov 18, 2017
Version v2.0.7 10.5281/zenodo.268037 Feb 2, 2017
Cite all versions? You can cite all versions by using the DOI 10.5281/zenodo.597675. This DOI represents all versions, and will always resolve to the latest one. Read more.

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