Dataset Open Access

Species abundance information improves sequence taxonomy classification accuracy - HMP and NCBI data

Kaehler, Benjamin D; Bokulich, Nicholas A

Data used to test q2-clawback using taxonomic weights derived from shotgun sequencing experiments.

Includes reference sequences and taxonomies derived from the NCBI RefSeq database[1] and paired amplicon and shotgun sequencing results downloaded from the Human Microbiome Project[2].

References
1. O’Leary, N. A. et al. en. Nucleic Acids Res. 44, D733–45 (2016).
2. Huttenhower, C. et al. Nature 486, 207 (2012).

Files (2.3 MB)
Name Size
metadata.tsv
md5:6cd4bbac03a8189d45966d492e38679c
2.0 kB Download
ref-seq-v35.qza
md5:3ab61fd15184f4a67c0f6d24ad160ae2
1.4 MB Download
ref-tax.qza
md5:44f068b7b0098751512d299a8607f4df
355.8 kB Download
rep-seqs-340.qza
md5:2c41f55f4ab20abdd6de8ca391b4b511
180.7 kB Download
shotgun_samples.biom
md5:8e7f491c4de047cff36d44a4fa634b13
183.5 kB Download
table-340.qza
md5:892361695392587327d4e81df60cb3f2
111.5 kB Download
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