Published January 26, 2019
                      
                       | Version v1
                    
                    
                      
                        
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                  Species abundance information improves sequence taxonomy classification accuracy - HMP and NCBI data
- 1. Australian National University
- 2. Northern Arizona University
Description
Data used to test q2-clawback using taxonomic weights derived from shotgun sequencing experiments.
Includes reference sequences and taxonomies derived from the NCBI RefSeq database[1] and paired amplicon and shotgun sequencing results downloaded from the Human Microbiome Project[2].
References
1. O’Leary, N. A. et al. en. Nucleic Acids Res. 44, D733–45 (2016).
2. Huttenhower, C. et al. Nature 486, 207 (2012).
Files
      
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    | Name | Size | Download all | 
|---|---|---|
| md5:6cd4bbac03a8189d45966d492e38679c | 2.0 kB | Download | 
| md5:3ab61fd15184f4a67c0f6d24ad160ae2 | 1.4 MB | Download | 
| md5:44f068b7b0098751512d299a8607f4df | 355.8 kB | Download | 
| md5:2c41f55f4ab20abdd6de8ca391b4b511 | 180.7 kB | Download | 
| md5:8e7f491c4de047cff36d44a4fa634b13 | 183.5 kB | Download | 
| md5:892361695392587327d4e81df60cb3f2 | 111.5 kB | Download | 
Additional details
Related works
- Is supplement to
- 10.1101/406611 (DOI)