Dataset Open Access
Species abundance information improves sequence taxonomy classification accuracy - HMP and NCBI data
Kaehler, Benjamin D;
Bokulich, Nicholas A
Data used to test q2-clawback using taxonomic weights derived from shotgun sequencing experiments.
Includes reference sequences and taxonomies derived from the NCBI RefSeq database[1] and paired amplicon and shotgun sequencing results downloaded from the Human Microbiome Project[2].
References
1. O’Leary, N. A. et al. en. Nucleic Acids Res. 44, D733–45 (2016).
2. Huttenhower, C. et al. Nature 486, 207 (2012).
Files
(2.3 MB)
| Name | Size | |
|---|---|---|
|
metadata.tsv
md5:6cd4bbac03a8189d45966d492e38679c |
2.0 kB | Download |
|
ref-seq-v35.qza
md5:3ab61fd15184f4a67c0f6d24ad160ae2 |
1.4 MB | Download |
|
ref-tax.qza
md5:44f068b7b0098751512d299a8607f4df |
355.8 kB | Download |
|
rep-seqs-340.qza
md5:2c41f55f4ab20abdd6de8ca391b4b511 |
180.7 kB | Download |
|
shotgun_samples.biom
md5:8e7f491c4de047cff36d44a4fa634b13 |
183.5 kB | Download |
|
table-340.qza
md5:892361695392587327d4e81df60cb3f2 |
111.5 kB | Download |
132
47
views
downloads
| All versions | This version | |
|---|---|---|
| Views | 132 | 132 |
| Downloads | 47 | 47 |
| Data volume | 13.2 MB | 13.2 MB |
| Unique views | 128 | 128 |
| Unique downloads | 23 | 23 |
Indexed in
- Publication date:
- January 26, 2019
- DOI:
-
- Related identifiers:
- Supplement to
- License (for files):
- Creative Commons Attribution 4.0 International