Software Open Access

SELDOM V1.0.3

David Henriques; Alejandro F. Villaverde; Miguel Rocha; Julio Saez-Rodriguez; Julio R. Banga

SELDOM stands for enSEmbLe of Dynamic lOgic-based Models. SELDOM is framework for building predictive signalling models that combines mutual information, ensemble modelling, logic-based ODEs and optimization. Here we provide a short manual on how to use SELDOM both for reproducing our results and adapting SELDOM to solve a new problem. The code is not distributed with the purpose of being a user friendly software. It requires a LINUX cluster as well as some knowledge in LINUX and R programming.

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