Software Open Access

gene-ontology: Initial zenodo release

Daniel Himmelstein; Casey Greene; Venkat Malladi; Frederic Bastian; Sergio Baranzini

This project provides easy-to-use Gene Ontology annotations. Annotations relate GO Terms with Entrez Genes. We provide genes as Entrez GeneIDs and as symbols.

Users choose from the following options:

  • species: which species to retrieve annotations for
  • evidence: whether to use all annotations or annotations from experimental evidence only
  • propagation: whether to include only direct annotations or infer annotations based on ontology structure

The project includes a website for browsing and downloading annotation files.

Files (108.7 MB)
Name Size
108.7 MB Download
All versions This version
Views 1414
Downloads 11
Data volume 108.7 MB108.7 MB
Unique views 1414
Unique downloads 11


Cite as