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Published July 6, 2015 | Version v0.15
Software Open

Bio-ViennaNGS: Bio::ViennaNGS v0.15

Authors/Creators

  • 1. University of Vienna
  • 2. Institute for Theoretical Chemistry, University of Vienna
  • 3. TBI

Description

  • fixed path creation in bed_or_bam2bw()
  • fixed scalar initialization bug
  • fixed bug in Bio::ViennaNGS::BamStat
  • scripts/bam_to_bigwig.pl can now produce normalized bigWigs
  • added functionality to compute RPKM in Bio::ViennaNGS::Expression
  • added tests for UCSC.pm
  • added tests for SpliceJunc.pm

Files

Bio-ViennaNGS-v0.15.zip

Files (1.3 MB)

Name Size
md5:42346eeed3f6c8018173d5b34121bc34
1.3 MB Preview Download

Additional details

Related works

Is supplement to
https://github.com/mtw/Bio-ViennaNGS/tree/v0.15 (URL)