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Published September 26, 2025 | Version v1
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A new species and a new record of Mallocybe (Inocybaceae, Agaricales) from Pakistan uncovered by integrated morphology and phylogeny

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Kiran, Munazza, Sana, Sattar, Ammara, Khalid, Abdul Nasir (2025): A new species and a new record of Mallocybe (Inocybaceae, Agaricales) from Pakistan uncovered by integrated morphology and phylogeny. Phytotaxa 720 (1): 1-18, DOI: 10.11646/phytotaxa.720.1.1, URL: https://doi.org/10.11646/phytotaxa.720.1.1

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urn:lsid:plazi.org:pub:FFCBFFAF4B50FFA99900934AFFD5FFAA
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http://publication.plazi.org/id/FFCBFFAF4B50FFA99900934AFFD5FFAA

Cites
Publication: 10.11646/phytotaxa.478.1.3 (DOI)
Publication: 10.3897/mycokeys.89.81148 (DOI)
Publication: 10.1007/s13225-015-0346-5 (DOI)
Publication: 10.63482/v70w6n03 (DOI)
Publication: 10.7146/mogbiosci.v56.142868 (DOI)
Publication: 10.2509/naf2010.005.0057 (DOI)
Publication: 10.3767/persoonia.2023.50.05 (DOI)
Publication: 10.3767/persoonia.2020.44.11 (DOI)
Publication: 10.1016/j.gecco.2021.e01672 (DOI)
Publication: 10.1007/s00572-021-01038-1 (DOI)
Publication: 10.1111/j.1365-294X.1993.tb00005.x (DOI)
Publication: 10.11646/phytotaxa.230.3.1 (DOI)
Publication: 10.3390/d14040239 (DOI)
Publication: 10.1007/s11557-022-01854-5 (DOI)
Publication: 10.1007/978-1-4757-1939-0_10 (DOI)
Publication: 10.1007/s11703-011-1062-x (DOI)
Publication: 10.11646/phytotaxa.659.1.4 (DOI)
Publication: 10.3390/jof8030256 (DOI)
Publication: 10.3159/TORREY-D-18-00060.1 (DOI)
Publication: 10.1111/j.1365-2699.2008.02055.x (DOI)
Publication: 10.1080/00275514.2019.1668906 (DOI)
Publication: 10.3114/fuse.2023.12.09 (DOI)
Publication: 10.1109/GCE.2010.5676129 (DOI)
Publication: 10.11646/phytotaxa.640.3.3 (DOI)
Publication: 10.1371/journal.pone.0062419 (DOI)
Publication: 10.1007/s00572-008-0200-7 (DOI)
Publication: 10.1080/0028825X.2024.2381734 (DOI)
Publication: 10.1093/sysbio/sys029 (DOI)
Publication: 10.1186/1471-2148-8-50 (DOI)
Publication: 10.1016/j.myc.2020.06.006 (DOI)
Publication: 10.3897/mycokeys.99.86844 (DOI)
Publication: 10.11646/phytotaxa.690.1.4 (DOI)
Publication: 10.11646/phytotaxa.690.1.6 (DOI)
Publication: 10.29203/ka.2011.446 (DOI)
Publication: 10.1017/S0269727000010885 (DOI)
Publication: 10.1016/B978-0-12-372180-8.50042-1 (DOI)
Has part
Taxonomic treatment: 10.5281/zenodo.18881377 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/03F287D74B58FFA3998893BEFD60F9E7 (URL)
Taxonomic treatment: 10.5281/zenodo.18881381 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/03F287D74B5AFFA299889533FDC1F782 (URL)
Taxonomic treatment: 10.5281/zenodo.18881383 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/03F287D74B5DFFA4998897F8FA7EF916 (URL)
Dataset: http://table.plazi.org/id/DF2466494B52FFAB9988960EFED5FA0E (URL)
Figure: 10.5281/zenodo.18415572 (DOI)
Figure: 10.5281/zenodo.18415574 (DOI)
Figure: 10.5281/zenodo.18415578 (DOI)
Figure: 10.5281/zenodo.18415582 (DOI)
Figure: 10.5281/zenodo.18415586 (DOI)
Figure: 10.5281/zenodo.18415594 (DOI)
Figure: 10.5281/zenodo.18415600 (DOI)
Is source of
Dataset: https://www.gbif.org/dataset/184a542a-5bca-40fe-a41e-29542e414dda (URL)

References

  • Aignon, H.L., Naseer, A., Matheny, B.P., Yorou, N.S. & Ryberg, M. (2021) Mallocybe africana (Inocybaceae, Fungi), the first species of Mallocybe described from Africa. Phytotaxa 478 (1): 49-60. https://doi.org/10.11646/phytotaxa.478.1.3
  • Aman, N., Khalid, A.N. & Moncalvo, J.M. (2022) A compendium of macrofungi of Pakistan by ecoregions. MycoKeys 89: 171-233. https://doi.org/10.3897/mycokeys.89.81148
  • Ariyawansa, H.A., Hyde, K.D., Jayasiri, S.C., Buyck, B., Chethana, K.W.T., Dai, D.Q., Dai, Y.C., Daranagama, D.A., Jayawardena, R.S., Lucking, R., Ghobad-Nejhad, M., Niskanen, T., Thambugala, K.M., Voigt, K., Zhao, R.L., Li, G.-J., Doilom, M., Boonmee, S., Yang, Z.L., Cai, Q., Cut, Y.Y., Chen, J., Cui, B.K., Chen, J.J., Dayarathne, M.C., Dissanayake, A.J., Ekanayaka, A.H., Hashimoto, A., Hongsanan, S., Jones, E.B.G., Larsson, E., Li, W.J., Li, Q.R., Liu, J.K., Luo, Z.L., Maharachchikumbura, S.S.N., Mapook, A., McKenzie, E.H.C., Norphanphoun, C., Konta, S., Pang, K.L., Perera, R.H., Phookamsak, R., Phukhamsakda, C., Pinruan, U., Randrianjohany, E., Singtripop, C., Tanaka, K., Tian, C.M., Tibpromma, S., Abdel-Wahab, M.A., Wanasinghe, D.N., Wijayawardene, N.N., Zhang, J.F., Zhang, H., Abdel-Aziz, F.A., Wedin, M., Westberg, M., Ammirati, J.F., Bulgakov, T.S., Lima, D.X., Callaghan, T.M., Callac, P., Chang, C.-H., Coca, L.F., Dal-Forno, M., Dollhofer, V., Fliegerova, K., Greiner, K., Griffith, G.W., Ho, H.-M., Hofstetter, V., Jeewon, R., Kang, J.C., Wen, T.-C., Kirk, P.M., Kytovuori, I., Lawrey, J.D., Xing, J., Li, H., Liu, Z.Y., Liu, X.Z., Liimatainen, K., Lumbsch, H.T., Matsumura, M., Moncada, B., Nuankaew, S., Parnmen, S., de Azevedo Santiago, A.L.C.M., Sommai, S., Song, Y., de Souza, C.A.F., de Souza-Motta, C.M., Su, H.Y., Suetrong, S., Wang, Y., Wei, S.-F., Wen, T.C., Yuan, H.S., Zhou, L.W. & Reblova, M., Fournier, J., Camporesi, E., Luangsa-ard, J.J. & Tasanathai, K., Khonsanit, A., Thanakitpipattana, D., Somrithipol, S., Diederich, P., Millanes, A.M., Common, R.S., Stadler, M., Yan, J.Y., Li, X., Lee, H.W., Nguyen, T.T.T., Lee, H.B., Battistin, E., Marsico, O., Vizzini, A., Vila, J., Ercole, E., Eberhardt, U., Simonini, G., Wen, H.-A., Chen, X.-H., Miettinen, O. & Spirin, V. (2015) Fungal diversity notes 111-252-taxonomic and phylogenetic contributions to fungal taxa. Fungal Diversity 75: 27-274. https://doi.org/10.1007/s13225-015-0346-5
  • Aron, C.E., Bandini, D. & Oertel, B. (2024) Mallocybe batrachiorum (Inocybaceae) a new species found in wet habitats. Field Mycology 25 (3): 91-97. https://doi.org/10.63482/v70w6n03
  • Bandini, D., Oertel, B. & Eberhardt, U. (2022) Noch mehr Risspilze (3): Einundzwanzig neue Arten der Familie Inocybaceae. Mycologia Bavarica 22: 31-138.
  • Bon, M. (1984) Macromycetes de la zone maritime picarde (8eme supplement). Leslicoles. Documents Mycologiques 14: 11-17.
  • Borgen, T. & Elborne, S.A. (2006) A checklist of the Greenland. In: Arctic and Alpine Mycology 6: Proceedings of the Sixth International Symposium on Arcto-Alpine Mycology (ISAM 6), Greenland, 11-21 August 2000. Vol. 56. Museum Tusculanum Press, pp. 37. https://doi.org/10.7146/mogbiosci.v56.142868
  • Brugaletta, E., Consiglio, G. & Marchetti, M. (2017) Inocybe siciliana, unanuova specie del Sottogenere Mallocybe. Rivista di Micologia 60 (3): 195-209.
  • Courtecuisse, R. (1986) Transect mycologique dunaire sur la Cote d'Opale (France) II: Les groupements de l'hygrosere. Documents Mycologiques 17 (66): 1-70.
  • Cripps, C.L., Larsson, E. & Horak, E. (2010) Subgenus Mallocybe (Inocybe) in the Rocky Mountain alpine zone with molecular reference to European Arctic-alpine material. North American Fungi 5 (5): 97-126. https://doi.org/10.2509/naf2010.005.0057
  • Crous, P.W., Osieck, E.R., Shivas, R.G., Tan, Y.P., Bishop-Hurley, S.L., Esteve-Raventos, F., Larsson, E., Luangsa-ard, J.J., Pancorbo, F., Balashov, S., Baseia, I.G., Boekhout, T., Chandranayaka, S., Cowan, D.A., Cruz, R.H.S.F., Czachura, P., De la Pena-Lastra, S., Dovana, F., Drury, B., Fell, J., Flakus, A., Fotedar, R., Jurjevic, Z., Kolecka, A., Mack, J., Maggs-Kolling, G., Mahadevakumar, S., Mateos, A., Mongkolsamrit, S., Noisripoom, W., Plaza, M., Overy, D.P., Piatek, M., Sandoval-Denis, M., Vauras, J. & Wingfield, M.J. (2023) Fungal Planet description sheets: 1478-1549. Persoonia 50 (1): 158-310. https://doi.org/10.3767/persoonia.2023.50.05
  • Crous, P.W., Wingfield, M.J., Chooi, Y.-H., Gilchrist, C.L.M., Lacey, E., Pitt, J.I., Roets, F., Swart, W.J., Cano-Lira, J.F., ValenzuelaLopez, N., Hubka, V., Shivas, R.G., Stchigel, A.M., Holdom, D.G., Jurjevic, Z., Kachalkin, A.V., Lebel, T., Lock, C., Martin, M.P., Tan, Y.P., Tomashevskaya, M.A., Vitelli, J.S., Baseia, I.G., Bhatt, V.K., Brandrud, T.E., De Souza, J.T., Dima, B., Lacey, H.J., Lombard, L., Johnston, P.R., Morte, A., Papp, V., Rodriguez, A., Rodriguez-Andrade, E., Semwal, K.C., Tegart, L., Abad, Z.G., Akulov, A., Alvarado, P., Alves, A., Andrade, J.P., Arenas, F., Asenjo, C., Ballara, J., Barrett, M.D., Berna, L.M., Berraf-Tebbal, A., Bianchinotti, M.V., Bransgrove, K., Burgess, T.I., Carmo, F.S., Chavez, R., Cmokova, A., Dearnaley, J.D.W., de A. Santiago, A.L.C.M., Freitas-Neto, J.F., Denman, S., Douglas, B., Dovana, F., Eichmeier, A., Esteve-Raventos, F., Farid, A., Fedosova, A.G., Ferisin, G., Ferreira, R.J., Ferrer, A., Figueiredo, C.N., Figueiredo, Y.F., Reinoso-Fuentealba, C.G., Garrido-Benavent, I., Canete-Gibas, C.F., Gil-Duran, C., Glushakova, A.M., Goncalves, M.F.M., Gonzalez, M., Gorczak, M., Gorton, C., Guard, F.E., Guarnizo, A.L., Guarro, J., Gutierrez, M., Hamal, P., Hien, L.T., Hocking, A.D., Houbraken, J., Hunter, G.C., Inacio, C.A., Jourdan, M., Kapitonov, V.I., Kelly, L., Khanh, T.N., Kislo, K., Kiss, L., Kiyashko, A., Kolarik, M., Kruse, J., Kubatova, A., Kucera, V., Kucerova, I. & Kusan, I. (2020) Fungal Planet description sheets: 1042-1111. Persoonia 44: 301-459. https://doi.org/10.3767/persoonia.2020.44.11
  • Csizmar, M., Cseh, P., Dima, B., Orloci, L. & Bratek, Z. (2021) Macrofungi of urban Tilia avenues and gardens in Hungary. Global Ecology and Conservation 28: e01672. https://doi.org/10.1016/j.gecco.2021.e01672
  • Daskalopoulos, V., Polemis, E., Fryssouli, V., Kottis, L., Bandini, D., Dima, B. & Zervakis, G.I. (2021) Mallocybe heimii ectomycorrhizae with Cistus creticus and Pinus halepensis in Mediterranean littoral sand dunes -assessment of phylogenetic relationships to M. arenaria and M. agardhii. Mycorrhiza 31 (4): 497-510. https://doi.org/10.1007/s00572-021-01038-1
  • Favre, J. (1955) Les champignons superieurs de la zone alpine du Parc National Suisse. Ergebnisse der wissenschaftlichen Untersuchungen des Schweizerrischen Nationalparks 5: 1-212.
  • Gardes, M. & Bruns, T.D. (1993) ITS primers with enhanced specificity for basidiomycetes -application to the identification of mycorrhizae and rusts. Molecular Ecology 2: 113-118. https://doi.org/10.1111/j.1365-294X.1993.tb00005.x
  • Gulden, G. & Torkelsen, A.E. (1996) A catalogue of Svalbard plants, fungi, algae and cyanobacteria. Part 3. Fungi I. Basidiomycota: Agaricales, Gasteromycetales, Aphyllophorales, Exobasidiales, Dacrymycetales, and Tremellales. Skrifter-Norsk Polarinstitutt 198: 173-206.
  • Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. In: Nucleic acids symposium series Vol. 41. pp. 95-98.
  • Horak, E., Matheny, P.B., Desjardin, D.E. & Soytong, K. (2015) The genus Inocybe (Inocybaceae, Agaricales, Basidiomycota) in Thailand and Malaysia. Phytotaxa 230: 201-238. https://doi.org/10.11646/phytotaxa.230.3.1
  • Hu, Y., Karunarathna, S.C., Li, H., Galappaththi, M.C., Zhao, C.L., Kakumyan, P. & Mortimer, P.E. (2022) The impact of drying temperature on basidiospore size. Diversity 14 (4): 239. https://doi.org/10.3390/d14040239
  • Hu, J.H., Yu, W.J., Deng, L.S., Fan, Y.G., Bau, T., Tang, L.P., Lin, W.F. & Deng, C.Y. (2023) The detection of major clades and new species of Mallocybe (Inocybaceae, Agaricales) from China with elongate cheilocystidia. Mycological Progress 22: 15. https://doi.org/10.1007/s11557-022-01854-5
  • Huhtinen, S. (1987) New Svalbard Fungi. In: Laursen, G.A., Ammirati, J.F. & Redhead, S.A. (Eds.) Arctic-alpine Mycology II. Plenum Press, New York, pp. 123-151. https://doi.org/10.1007/978-1-4757-1939-0_10
  • Khan, N., Ahmed, M., Shaukat, S.S., Wahab, M. & Siddiqui, M.F. (2011) Structure, diversity, and regeneration potential of Monotheca buxifolia (Falc.) A. DC. dominated forests of Lower Dir District, Pakistan. Frontiers of Agriculture in China 5: 106-121. https://doi.org/10.1007/s11703-011-1062-x
  • Kirk, P.M., Cannon, P.F., Minter, D.W. & Stalpers, J.A. (2008) Dictionary of the Fungi. 10th ed. CAB International, Wallingford, UK.
  • Kuhner, R. (1956) Complements a la'Flore analytique'. VI) Inocybe goniospores et Inocybe acystidies. Especes nouvelles ou critiques. Bulletin de la Societe mycologique de France 71: 169-201.
  • Kuhner, R. (1988) Diagnoses de Quelques Nouveaux Inocybes recoltes en Zone Alpine de la Vanoise (Alpes Francaises). Documents Mycologiques 19 (74): 17-22.
  • Liu, F., Liu, C., Chen, X.H., Lan, Z.Y., Xu, X.L., Liu, Y.G. & Yang, C.L. (2024) A novel Mallocybe species (Inocybaceae, Agaricales) discovered in the Longquan Mountain of Southwestern China. Phytotaxa 659: 56-66. https://doi.org/10.11646/phytotaxa.659.1.4
  • Mao, N., Xu, Y.Y., Lv, J.C. & Fan, L. (2022) New Species of Mallocybe and Pseudosperma from North China. Journal of Fungi 8 (3): 256. https://doi.org/10.3390/jof8030256
  • Matheny, P.B. & Bougher, N.L. (2017) Fungi of Australia: Inocybaceae. CSIRO Publishing, Canberra.
  • Matheny, P.B. & Kudzma, L.V. (2019) New species of Inocybe (Inocybaceae) from eastern North America. Journal of Torrey Botanical Society 146: 213-235. https://doi.org/10.3159/TORREY-D-18-00060.1
  • Matheny, P.B., Aime, M.C., Bougher, N.L., Buyck, B., Desjardin, D.E., Horak, E., Kropp, B.R., Lodge, D.L., Soytong, K., Trappe, J.M. & Hibbett, D.S. (2009) Out of the Palaeotropics? Historical biogeography and diversification of the cosmopolitan ectomycorrhizal mushroom family Inocybaceae. Journal of Biogeography 36: 577-592. https://doi.org/10.1111/j.1365-2699.2008.02055.x
  • Matheny, P.B., Hobbs, A.M. & Esteve-Raventos, F. (2019) Genera of Inocybaceae: New Skin for the Old Ceremony. Mycologia 112: 83-120. https://doi.org/10.1080/00275514.2019.1668906
  • Matheny, P.B., Kudzma, L.V., Graddy, M.G., Mardini, S.M., Noffsinger, C.R., Swenie, R.A., Walker, N.C., Campagna, S.R., Halling, R., Lebeuf, R., Kuo, M., Lewis, D.P., Smith, M.E., Tabassum, M., Trudell, S.A. & Vauras, J. (2023) A phylogeny for North American Mallocybe (Inocybaceae) and taxonomic revision of eastern North American taxa. Fungal Systematics and Evolution 12: 153-202. https://doi.org/10.3114/fuse.2023.12.09
  • Miller, M.A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In: 2010 gateway computing environments workshop (GCE). Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/GCE.2010.5676129
  • Munsell, A.H. (1975) Soil color charts. Munsell, Baltimore, USA.
  • Naseer, A., Khurshid, R., Fan, Y.G. & Khalid, A.N. (2024) Two new species of Mallocybe from Himalayan forests of Asia. Phytotaxa 640: 255-264. https://doi.org/10.11646/phytotaxa.640.3.3
  • Noordeloos, M.E. (2020) Paddenstoelen III. KNNV Uitgeverij.
  • Osmundson, T.W., Robert, V.A., Schoch, C.L., Baker, L.J., Smith, A., Robich, G., Mizzan, L. & Garbelotto, M.M. (2013) Filling Gaps in Biodiversity Knowledge for Macrofungi: Contributions and Assessment of an Herbarium Collection DNA Barcode Sequencing Project. PLoS ONE 8: e62419. https://doi.org/10.1371/journal.pone.0062419
  • Palmer, J.M., Lindner, D.L. & Volk, T.J. (2008) Ectomycorrhizal characterization of an American chestnut (Castanea dentata)-dominated community in Western Wisconsin. Mycorrhiza 19 (1): 27-36. https://doi.org/10.1007/s00572-008-0200-7
  • Rambaut, A. (2014) FigTree v1.4.2. Available from: http://tree.bio.ed.ac.uk/software/figtree (accessed 25 February 2025)
  • Rathnayaka, A.R., Tennakoon, D.S., Jones, G.E., Wanasinghe, D.N., Bhat, D.J., Priyashantha, A.H., Stephenson, S.L., Tibpromma, S. & Karunarathna, S.C. (2025) Significance of precise documentation of hosts and geospatial data of fungal collections, with an emphasis on plant-associated fungi. New Zealand Journal of Botany 63: 462-489. https://doi.org/10.1080/0028825X.2024.2381734
  • Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Hohna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539-542. https://doi.org/10.1093/sysbio/sys029
  • Ryberg, M., Nilsson, R.H., Kristiansson, E., Topel, M., Jacobsson, S. & Larsson, E. (2008) Mining metadata from unidentified ITS sequences in GenBank: a case study in Inocybe (Basidiomycota). BMC Evolutionary Biology 8: 50. https://doi.org/10.1186/1471-2148-8-50
  • Saba, M. & Khalid, A.N. (2020) Mallocybe velutina (Agaricales, Inocybaceae), a new species from Pakistan. Mycoscience 61: 348-352. https://doi.org/10.1016/j.myc.2020.06.006
  • Saba, M., Khalid, A.N. & Sarwar, S. (2023) New species of Mallocybe (Agaricales, Inocybaceae) from Pakistan, based on morphological and molecular evidence. MycoKeys 99: 171. https://doi.org/10.3897/mycokeys.99.86844
  • Sana, M. & Kiran, M. (2025) Morpho-anatomical and nrITS based identification of Lactarius swaticus (Russulaceae, Russulales) from Pakistan: An addition to the global mycoflora. Phytotaxa 690: 47-62. https://doi.org/10.11646/phytotaxa.690.1.4
  • Sana, M., Kiran, M. & Ali, W. (2025) Inosperma pakistanicum sp. nov. (Inocybaceae, Agaricales) from Swat, Pakistan. Phytotaxa 690: 77-88. https://doi.org/10.11646/phytotaxa.690.1.6
  • Vauras, J. & Larsson, E. (2011) Inocybe myriadophylla, a new species from Finland and Sweden. Karstenia 51: 31-36. https://doi.org/10.29203/ka.2011.446
  • Vellinga, E.C. (1988) Glossary. In: Bas, C., Kuyper, T.W., Noordeloos, M.E. & Vellinga, E.C. (Eds.) Flora Agaricina neerlandica. Vol 1. A.A. Balkema, Rotterdam, pp. 54-64.
  • Watling, R. & Rotheroe, M. (1989) Macrofungi of sand dunes. Proceedings of the Royal Society of Edinburgh Section B. Biological Sciences 96: 111-126. https://doi.org/10.1017/S0269727000010885
  • White, T.J., Bruns, T., Lee, S. & Taylor, J.W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. & White, T.J. (Eds.) PCR protocols: a guide to methods and applications. Academic Press, pp. 315-322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1