Published May 20, 2015 | Version 1.0.0
Software Open

TraFiC: 1.0.0 - initial release

Authors/Creators

  • 1. Cancer Genome Project, Wellcome Trust, Sanger Institute

Description

This version closely mirrors that used in recent publications with very minor enhancements for stability reasons.

This was developed using data aligned by the BWA backtrack algorithm (BWA aln+sampe) and is known to be less sensitive when BWA mem aligned data is used as input.

A version with better support for aligners that generate split mappings is planned for release later this year.

Files

TraFiC-1.0.0.zip

Files (1.1 MB)

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md5:043f0bf0925a62292ae481e310f73093
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Additional details

Related works

Is supplement to
10.1126/science.1251343 (DOI)
https://github.com/cancerit/TraFiC/tree/1.0.0 (URL)