Dataset Open Access

Aberystwyth Leaf Evaluation Dataset

Bell, Jonathan; Dee, Hannah M.

We are releasing the dataset acquired to support the work of the EPSRC funded project “Dynamic Modelling of Plant Growth with Computer Vision” (grant code EP/LO17253/1) in the hope that its availability will help further advance the state of the art in the use of image analysis for plant sciences. It is a visible light, top down, timelapse image dataset of Arabidopsis thaliana (Arabidopsis). It incorporates the original images, some with leaf-level ground truth annotations, harvested plant ground truth data and scanned images together with supporting software.

  • 4 sets of 20 Arabidopsis Thaliana plants have been grown in trays
  • Images of each tray are taken in a 15 minute timelapse sequence using a robotic greenhouse system
  • Periodically, plants from each tray are sacrificed to record destructive measurements
  • A subset of these images have been hand-annotated to provide leaf-based image ground truth.
    • In total, there are 56 annotated ground truth images containing 916 hand-marked up individual arabidopsis plants
  • We also release software to help with the analysis of these images

Files (63.7 GB)
Name Size
aberystwyth-leaf-evaluation.pdf
md5:d19f9d73aa6b2d4a4130ca948a3e9dcf
335.1 kB Download
harvested_plant_data.zip
md5:4f1598cf2836139161ccd0794b9a83e5
1.8 GB Download
images_and_annotations.zip
md5:d0ab2ab9c631953be8e27f12af35ffe7
61.6 GB Download
software.zip
md5:0dea54d6c682c93f2f21e8f2137ca1f2
226.7 MB Download

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