griffinp/Sel_Line: Data Processing code for 'Genomic Trajectories to Desiccation Resistance'

This set of non-production-ready scripts covers the genomic data processing described in the manuscript 'Genomic Trajectories to Desiccation Resistance: Convergence and Divergence in Genomic Responses among Replicate Selected Drosophila Lines' by Philippa C. Griffin, Sandra B. Hangartner, Alexandre Fournier-Level and Ary A. Hoffmann (2016).

These scripts are a custom version of the rubra pipeline by Pope B., Sloggett C., Philip G., Wakefield M. at https://github.com/bjpop/rubra: commit 9b52bd081c.