Published March 9, 2015
| Version v1
Software
Open
cgpBattenberg: v1.3.1
Authors/Creators
- 1. Wellcome Trust Sanger Institute
- 2. University of Oslo
Description
An installation helper, perl wrapper and the R program Battenberg which detects subclonality and copy number in matched NGS data.
Files
cgpBattenberg-1.3.1.zip
Additional details
References
- Proc Natl Acad Sci U S A. 2010 Sep 28;107(39):16910-5. doi: 10.1073/pnas.1009843107. Epub 2010 Sep 13.
- Cell. 2012 May 25;149(5):994-1007. doi: 10.1016/j.cell.2012.04.023. Epub 2012 May 17.
- PLoS Genet. 2009 Jun;5(6):e1000529. doi: 10.1371/journal.pgen.1000529. Epub 2009 Jun 19.
- Nat Commun. 2014 Jun 13;5:3934. doi: 10.1038/ncomms4934.
- Genome Biol. 2011 Aug 29;12(8):R80. doi: 10.1186/gb-2011-12-8-r80.
- BMC Genomics. 2012 Nov 4;13:591. doi: 10.1186/1471-2164-13-591.