Published January 20, 2017 | Version v1
Journal article Open

Caenorhabditis monodelphis sp. n.: defining the stem morphology and genomics of the genus Caenorhabditis

  • 1. Ghent University
  • 2. Freie Universitaet Berlin
  • 3. University of Edinburgh

Description

Background

The genus Caenorhabditis has been central to our understanding of metazoan biology. The best-known species, Caenorhabditis elegans, is but one member of a genus with around 50 known species, and knowledge of these species will place the singular example of C. elegans in a rich phylogenetic context. How did the model come to be as it is today, and what are the dynamics of change in the genus?

Results

As part of this effort to "put C. elegans in its place", we here describe the morphology and genome of Caenorhabditis monodelphis sp. n., previously known as Caenorhabditis sp. 1. Like many other Caenorhabditis, C. monodelphis sp. n. has a phoretic association with a transport host, in this case with the fungivorous beetle Cis castaneus. Using genomic data, we place C. monodelphis sp. n. as sister to all other Caenorhabditis for which genome data are available. Using this genome phylogeny, we reconstruct the stemspecies morphological pattern of Caenorhabditis.

Conclusions

With the morphological and genomic description of C. monodelphis sp. n., another key species for evolutionary and developmental studies within Caenorhabditis becomes available. The most important characters are its early diverging position, unique morphology for the genus and its similarities with the hypothetical ancestor of Caenorhabditis.

Files

assembly_stats_abv500.txt

Files (167.3 MB)

Name Size Download all
md5:3fc85dd47ebd8f596fa1356efa9be1f6
512 Bytes Preview Download
md5:cab16d5476229f2c407cbf0df795195b
2.6 MB Download
md5:2f03c7a08bb09a25246bbf7a11f584d7
41.1 MB Download
md5:e6848bfd4645e6fa556d9adf0b89e5b3
115.2 MB Download
md5:b5c92f0c7da7be292e8d7d8631c161ae
8.2 MB Download
md5:1d4dfa73b1b1a8dda6353b6570f9cbbc
139.0 kB Preview Download