Dataset Open Access
Read-mapping for next-generation sequencing data (Wolbachia)
Gilks, William
Code, log files and QC data. NCBI SRA accession number SRP091004. Note that sequencing Wolbachia was not a central aim of the project, and was undertaken in order to maximise the amount of information that could be extracted from the raw genome sequence data targetted at the fruit-fly host.
The pre-print manuscript for this data is available on biorxiv: "Whole genome resequencing of a laboratory-adapted Drosophila melanogaster population sample" http://biorxiv.org/content/early/2016/10/17/081554 doi: http://dx.doi.org/10.1101/081554
Files
(5.9 MB)
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aligment_summary_metrics.zip
md5:9882bddfa5465cea2899d6a0bedbce74 |
205.8 kB | Download |
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baseCovDistr.zip
md5:39a46a5170b346a9fd159618fee201ae |
339.2 kB | Download |
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callable_loci.zip
md5:d2dc897469e6152365d714c9f77d74a6 |
73.1 kB | Download |
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dup_counts.zip
md5:8078590d364b91c998062ffa2ec9cd7f |
341.0 kB | Download |
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error_rates.zip
md5:fd6d12ff8f8b4448431b47a965f736fc |
354.6 kB | Download |
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insert_sizes.zip
md5:68126ab4afd1b6e369298a83fb7ac2ac |
931.4 kB | Download |
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qualDistrMetrics.zip
md5:07497a16c0791bf780efc6028ec3535f |
204.5 kB | Download |
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quality_by_cycle.zip
md5:8ba95d0edd7fbb24af13690e6de1004d |
449.0 kB | Download |
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readLengthDistr.zip
md5:d004e43088dc4bd553cd17fb662ddd5b |
159.7 kB | Download |
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realignment_intervals.zip
md5:c9dad71034753ab6dcbe7eff22791044 |
2.8 MB | Download |
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| All versions | This version | |
|---|---|---|
| Views | 129 | 128 |
| Downloads | 52 | 52 |
| Data volume | 27.9 MB | 27.9 MB |
| Unique views | 124 | 123 |
| Unique downloads | 16 | 16 |
Indexed in
- Publication date:
- October 9, 2016
- DOI:
-
- Keyword(s):
- Wolbachia NGS Genomics Drosophila
- Grants:
-
European Commission:
- 2SEXES_1GENOME - Sex-specific genetic effects on fitness and human disease (280632)
- Communities:
- License (for files):
- Creative Commons Attribution 4.0 International