Published September 28, 2023
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Table 7 in Phylogenetic history of golden moles and tenrecs (Mammalia: Afrotheria)
Authors/Creators
- 1. Institute for Communities and Wildlife in Africa, Department of Biological Sciences, University of Cape Town, Cape Town, South Africa
- 2. Department of Botany and Zoology, Stellenbosch University, Stellenbosch, South Africa
- 3. Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
- 4. Mpumalanga Tourism and Parks Agency, Lydenburg, South Africa
- 5. The Natural History Museum, London, United Kingdom
- 6. Institute for Biochemistry and Biology, University of Potsdam, Potsdam, Germany
- 7. Department of Zoology, University of Cambridge, Cambridge, United Kingdom
Description
Table 7. Chrysochlorid root positions depending on optimality criterion, model selection criteria, inclusion of morphological data, tenrecids and fossils. The column ‘Optimality’ shows results using equally weighted parsimony (eq), implied weighting with concavity constants of two (K 2) and four (K 4). The column ‘Tenrecs’ refers to the number of excluded tenrecs, either all (excluded) or all but Echinops and Microgale talazaci (Echinops-Mtal). ‘Root pp’ refers to the posterior probability of the first branching event within crown Chrysochloridae (if resolved and applicable only to Bayesian analyses). Asia = Chrysochloris asiatica, crypto = Cryptochloris, Eremi = Eremitalpa, Kili = Kilimatalpa, MPTs = Most Parsimonious Trees.
| Name | Optimality | Morph | Tenrecs | Fossils | MPTs | Length | Root | Root pp |
|---|---|---|---|---|---|---|---|---|
| extant | eq | Included | Included | Excluded | 2 | 10054 | Asia-crypto | |
| extant K 2 | K 2 | Included | Included | Excluded | 1 | 978.35 | Eremi | |
| extant K 4 | K 4 | Included | Included | Excluded | 1 | 702.15 | Eremi then Huetia | |
| dna | eq | Excluded | Included | Excluded | 2 | 9551 | Asia-crypto | |
| dna K 2 | K 2 | Excluded | Included | Excluded | 1 | 922.01 | Eremi | |
| dna K 4 | K 4 | Excluded | Included | Excluded | 1 | 662.83 | Eremi | |
| all | eq | Included | Included | Included | 2772 | 10098 | Polytomy | |
| all K 2 | K 2 | Included | Included | Included | 485 | 982.81 | Eremi + arenosa | |
| all K 4 | K 4 | Included | Included | Included | 72 | 705.94 | Eremi + arenosa then Huetia | |
| dnaEcTa | eq | Excluded | Echinops-Mtal | Excluded | 2 | 5841 | Asia-crypto | |
| dna K 2EcTa | K 2 | Excluded | Echinops-Mtal | Excluded | 1 | 534.88 | Asia-crypto | |
| dna K 4EcTa | K 4 | Excluded | Echinops-Mtal | Excluded | 1 | 363.5 | Asia-crypto | |
| extantNT | eq | Included | Excluded | Excluded | 1 | 4839 | Asia-crypto | |
| extant K 2NT | K 2 | Included | Excluded | Excluded | 1 | 417.34 | Asia-crypto | |
| extant K 4NT | K 4 | Included | Excluded | Excluded | 1 | 283.1 | Asia-crypto | |
| extantEcTa | eq | Included | Echinops-Mtal | Excluded | 2 | 6201 | Asia-crypto | |
| extant K 2EcTa | K 2 | Included | Echinops-Mtal | Excluded | 1 | 570.75 | Asia-crypto | |
| extant K 4EcTa | K 4 | Included | Echinops-Mtal | Excluded | 1 | 387.92 | Asia-crypto | |
| dnaNT | eq | Excluded | Excluded | Excluded | 1 | 4541 | Asia-crypto | |
| dna K 2NT | K 2 | Excluded | Excluded | Excluded | 1 | 392.43 | Asia-crypto | |
| dna K 4NT | K 4 | Excluded | Excluded | Excluded | 1 | 265.64 | Asia-crypto | |
| all12febAIC | Bayes-AICc | Included | Included | Included | Polytomy | |||
| dna12febAIC | Bayes-AICc | Excluded | Included | Excluded | Polytomy | |||
| dna12febAICEcTa | Bayes-AICc | Excluded | Echinops-Mtal | Excluded | Kili-chryso-crypto | 0.76 | ||
| dna12febAICNoTrec | Bayes-AICc | Excluded | Excluded | Excluded | Kili-chryso-crypto | 0.93 | ||
| ext12febAIC | Bayes-AICc | Included | Included | Excluded | Kili-chryso-crypto | 0.56 | ||
| ext12febAICEcTa | Bayes-AICc | Included | Echinops-Mtal | Excluded | Kili-chryso-crypto | 0.77 | ||
| ext12febAICNoTrec | Bayes-AICc | Included | Excluded | Excluded | Kili-chryso-crypto | 0.93 | ||
| all19dec | Bayes-BIC | Included | Included | Included | Polytomy | |||
| dna19dec | Bayes-BIC | Excluded | Included | Excluded | Eremi-Huetia | 0.59 | ||
| dna19decEcTa | Bayes-BIC | Excluded | Echinops-Mtal | Excluded | Kili-chryso-crypto | 0.57 | ||
| dna19decNoTrec | Bayes-BIC | Excluded | Excluded | Excluded | Kili-chryso-crypto | 0.89 | ||
| ext19dec | Bayes-BIC | Included | Included | Excluded | Polytomy | |||
| ext19decEcTa | Bayes-BIC | Included | Echinops-mtal | Excluded | Kili-chryso-crypto | 0.73 | ||
| ext19decNoTrec | Bayes-BIC | Included | Excluded | Excluded | Kili-chryso-crypto | 0.9 | ||
| timetree | Bayes-BIC | Included | Included | Included | Polytomy |
Notes
Published as part of Bronner, Gary N., Mynhardt, Samantha, Bennett, Nigel C., Cohen, Lientjie, Crumpton, Nick, Hofreiter, Michael, Arnold, Patrick & Asher, Robert J., 2024, Phylogenetic history of golden moles and tenrecs (Mammalia: Afrotheria), pp. 209 in Zoological Journal of the Linnean Society 201 (201) on page 209, DOI: 10.1093/zoolinnean/zlad121, http://zenodo.org/record/11241136
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- Is part of
- Journal article: 10.1093/zoolinnean/zlad121 (DOI)
- Journal article: urn:lsid:plazi.org:pub:A41DFF91FFF8FFBFD4616629FFF4275F (LSID)
- Journal article: http://publication.plazi.org/id/A41DFF91FFF8FFBFD4616629FFF4275F (URL)
- Journal article: http://zenodo.org/record/11241136 (URL)