Published November 2, 2021
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TABLE 2 in Integrative systematics illuminates the relationships in two sponge-associated hydrozoan families (Capitata: Sphaerocorynidae and Zancleopsidae)
Description
TABLE 2 Molecular diagnostic characters for each sphaerocorynid genus and molecular marker, except for ITS. Positions refer to reference sequences belonging to S. bedoti (MHNG-INVE-0137431), with the GenBank accession numbers MZ457614 (16S), MZ457396 (COX1), MZ463827 (COX3), MZ457880 (18S), and MZ457801 (28S). When positions in the alignments differ from reference sequences they are also reported in parentheses. If a diagnostic position corresponds to a position in which there is a gap in the reference sequence, it is only reported in parentheses
| Genus / | Nr. of | Diagnostic position and relative nucleotide |
|---|---|---|
| molecular marker | diagnostic | |
| positions | ||
| Sphaerocoryne | ||
| 16S | 16 | 157: C, 174: G, 180: C, 209: A, 264: T, 269: A, 273: G, 287: T, 356: |
| C, 360: A, 374: A, 376: C, 394: A, 396: T, 406: A, 408: G | ||
| COX1 | 20 | 27: T, 30: T, 72: A, 129: A, 138: T, 177: C, 186: T, 271: C, 273: T, |
| 396: A, 402: A, 432: T, 466: A, 513: C, 528: T, 531: C, 570: T, 588: | ||
| T, 591: C, 594: T | ||
| COX3 | 22 | 37: A, 55: C, 63: A, 109: G, 144: T, 145: A, 147: T, 150: G, 168: |
| G, 271: G, 336: A, 357: A, 401: C, 408: A, 418: G, 429: A, 477: | ||
| A, 480: T, 483: A, 563: G, 564: G, 573: G | ||
| 18S | 10 | (75): -, 175 (177): C, 185 (187): T, 186 (188): T, 1297 (1300): G, 1298 |
| (1301): A, 1306 (1309): T, 1307 (1310): T, 1308 (1311): T, 1318 | ||
| (1321): T | ||
| 28S | 11 | 4: C, 32: T, 39: G, 43: C, 44: A, 45: T, 46: C, 93: T, 102: C, 103: |
| T, 109: G | ||
| Kudacoryne | ||
| 16S | 12 | 50: A, 51: T, 52: A, 173: C, 186: T, 203: C, 216: C, 259: T, 285: |
| A, 290: T, 294: A, 380: C | ||
| COX1 | 17 | 30: C, 33: G, 75: A, 84: C, 180: G, 189: A, 261: C, 291: T, 348: |
| A, 381: C, 402: C, 411: A, 432: C, 483: T, 516: C, 564: G, 597: T | ||
| COX3 | 14 | 15: A, 36: G, 61: C, 99: T, 183: A, 216: C, 237: C, 271: T, 276: |
| A, 306: A, 345: T, 402: A, 417: T, 591: C | ||
| 18S | 1 | 227 (230): A |
| 28S | 1 | 439 (440): C |
| Euphysilla | ||
| 16S | 5 | 184: G, 275: G, 287: -, 360: T, 434: G |
| COX1 | 9 | 168: T, 243: T, 274: C, 288: A, 289: G, 312: T, 339: T, 546: T, 603: T |
| COX3 | 4 | 79: G, 213: G, 255: T, 387: A |
| 18S | 2 | 1420 (1423): T, 1476 (1479): A |
| 28S | 0 | - |
| Heterocoryne | ||
| 16S | 21 | 53: C, 63: A, 116: C, 168: T, 178: G, 194: G, 208: C, 219: A, 276: G, |
| 278: T, 280: A, 286: T, 298: G, 299: T, 331: C, 333: T, 344: T, 352: | ||
| A, 354: T, 356: A, 379: C | ||
Notes
Published as part of Maggioni, Davide, Schuchert, Peter, Arrigoni, Roberto, Hoeksema, Bert W., Huang, Danwei, Strona, Giovanni, Seveso, Davide, Berumen, Michael L., Montalbetti, Enrico, Collins, Richard, Galli, Paolo & Montano, Simone, 2021, Integrative systematics illuminates the relationships in two sponge-associated hydrozoan families (Capitata: Sphaerocorynidae and Zancleopsidae), pp. 497 in Contributions to Zoology 90 on page 497, DOI: 10.1163/18759866-BJA10023, http://zenodo.org/record/8343324
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