Published October 30, 2022
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Table 4 in A new species of scops-owl (Aves, Strigiformes, Strigidae, Otus) from Principe Island (Gulf of Guinea, Africa) and novel insights into the systematic affinities within Otus
Authors/Creators
- 1. MHNC-UP, Museu de Historia Natural e da Ciencia da Universidade do Porto, Praca Gomes Teixeira, 4050 - 368 Porto, Portugal & CIBIO, Centro de Investigacao em Biodiversidade e Recursos Geneticos, InBIO Laboratorio Associado, Campus de Vairao, Universidade do Porto, 4485 - 661 Vairao, Portugal & FitzPatrick Institute of African Ornithology, University of Cape Town, Private Bag X 3, Rondebosch 7701, Cape Town, South Africa & Gulf of Guinea Biodiversity Centre, Sao Tome, Sao Tome and Principe & BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairao, 4485 - 661 Vairao, Portugal
- 2. Departamento de Biologia, Faculdade de Ciencias, Universidade do Porto, 4099 - 002 Porto, Portugal & BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairao, 4485 - 661 Vairao, Portugal & MNCN-CSIC, National Museum of Natural Sciences, Spanish National Research Council, Calle Jose Gutierrez Abascal 2, Madrid 28006, Spain & EDB, Laboratory of Evolution and Biologic Diversity, UMR 5174 CNRS-IRD, University of Toulouse III Paul Sabatier, 118 route de Narbonne, 31062 Toulouse, France
- 3. Krijgsgasthuisstraat 89, Ghent, Belgium
- 4. Praia Lapa, Principe, Sao Tome and Principe, Sao Tome and Principe
- 5. Department of Animal Behaviour, Bielefeld University, 33501 Bielefeld, Germany & Institut de Systematique, Evolution, Biodiversite (ISYEB), Museum national d'Histoire naturelle, CNRS, SU, EPHE, UA CP 51, 57 rue Cuvier, 75005 Paris, France
- 6. Naturalis Biodiversity Center, Darwinweg 2, PO Box 9517, 2300, RA, Leiden, Netherlands
- 7. Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Box 50007, 10405 Stockholm, Sweden & LIDA, School of Arts and Design, Polytechnic of Leiria, Rua Isidoro Inacio Alves de Carvalho, 2500 - 321 Caldas da Rainha, Leiria, Portugal
- 8. Centre for Ecology, Evolution and Environmental Changes (cE 3 c), Faculdade de Ciencias, Universidade de Lisboa, 1749 - 016 Lisboa, Portugal
- 9. Gulf of Guinea Biodiversity Centre, Sao Tome, Sao Tome and Principe & Departamento de Biologia Animal, Faculdade de Ciencias, Universidade de Lisboa, 1749 - 016 Lisboa, Portugal
- 10. Department of Animal Behaviour, Bielefeld University, 33501 Bielefeld, Germany & BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairao, 4485 - 661 Vairao, Portugal & Departamento de Biologia, Faculdade de Ciencias, Universidade do Porto, 4099 - 002 Porto, Portugal
Description
Table 4. List of scops-owls (Otus) samples and GenBank accession numbers for the gene fragments used in this study. Accession numbers in bold indicate sequences newly produced for this study. STP - São Tomé and Príncipe; EG - Equatorial Guinea; DRC - Democratic Republic of the Congo; CHIMERA - sequences for a given taxon obtained from different individuals.
| Taxon | Locality | 12S | 16S | ATP6 | COI | CYTB | ND2 | ND3 | KIAA | MYO2 | RAG1 | SACS | TGFB2 | TTN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| O. bikegila sp. nov. 1 | STP: Príncipe | OM978880 | OM978895 | OM913485 | OM937282 | OM937307 | OM937351 | ON016156 | OM937319 | OM937336 | ON016107 | ON016118 | ON016136 | ON016141 |
| O. bikegila sp. nov. 2 | STP: Príncipe | OM978881 | OM978896 | OM913486 | OM937283 | OM937308 | OM937352 | ON016157 | - | - | ON016108 | ON016119 | ON016137 | ON016142 |
| O. bikegila sp. nov. 3 | STP: Príncipe | OM978882 | OM978897 | - | OM937284 | OM937309 | OM937353 | ON016158 | - | OM937337 | ON016109 | ON016120 | ON016139 | ON016143 |
| O. bikegila sp. nov. 4 | STP: Príncipe | OM978883 | OM978898 | OM913487 | OM937285 | OM937310 | OM937354 | ON016159 | OM937320 | OM937338 | ON016110 | ON016121 | ON016140 | ON016144 |
| O. hartlaubi 1 | STP: São Tomé | OM978884 | OM978899 | EU601139 | OM937286 | EU601108 | EU601032 | EU600995 | OM937321 | EU601072 | - | ON016122 | EU600952 | ON016145 |
| O. hartlaubi 2 | STP: São Tomé | OM978885 | OM978900 | - | OM937287 | OM937303 | OM937349 | ON016160 | OM937322 | OM937329 | ON016111 | ON016123 | ON016130 | ON016146 |
| O. hartlaubi 3 | STP: São Tomé | OM978886 | OM978901 | - | OM937288 | OM937304 | OM937347 | ON016161 | OM937323 | OM937330 | ON016112 | ON016124 | ON016131 | ON016147 |
| O. hartlaubi 4 | STP: São Tomé | OM978887 | OM978902 | OM913483 | OM937289 | OM937305 | OM937348 | ON016162 | OM937324 | OM937331 | ON016113 | ON016125 | ON016132 | ON016148 |
| O. senegalensis senegalensis | South Africa | - | - | EU601166 | - | EU601127 | EU601056 | EU601019 | - | EU601098 | - | - | EU600976 | - |
| O. senegalensis feae | EG: Annobón | OM978891 | OM978908 | OM913484 | OM937293 | OM937306 | OM937350 | ON016155 | OM937327 | OM937333 | ON016116 | ON016128 | ON016138 | ON016151 |
| O. pembaensis 1 | Tanzania: Pemba | - | - | EU601157 | - | EU601123 | EU601048 | EU601010 | - | EU601090 | - | - | EU600967 | - |
| O. pembaensis 2 | Tanzania: Pemba | - | - | EU601158 | - | EU601124 | EU601049 | EU601011 | - | EU601091 | - | - | EU600968 | - |
| O. pamelae | Saudi Arabia | - | - | - | - | - | KC138819 | KC138827 | - | KC138812 | - | - | - | - |
| O. scops 1 | France | - | - | EU601146 | - | EU601115 | EU601039 | EU601001 | - | EU601079 | - | - | EU600958 | - |
| O. scops 2 | France | - | OM978906 | - | - | OM937314 | - | ON016164 | OM937325 | OM937334 | ON016114 | ON016126 | ON016135 | ON016149 |
| O. scops 3 | France | - | OM978907 | - | - | OM937313 | - | ON016165 | OM937326 | OM937339 | ON016115 | ON016127 | ON016133 | ON016150 |
| O. scops 4 | France | OM978890 | OM978905 | OM913488 | OM937292 | OM937312 | OM937355 | ON016163 | - | - | - | - | - | - |
| O. cyprius | Cyprus | - | - | - | KT803674 | OM937311 | - | - | - | - | - | - | - | - |
| O. brucei | CHIMERA- United Arab Emirates; Oman | - | - | - | - | EU348985 | KC138817 | KC138825 | - | KC138811 | EU348920 | - | - | - |
| O. longicornis | CHIMERA- Philippines - Isabela, Luzon; Unknown | U83751 | OM978909 | EU601151 | OM937294 | EU601119 | OM937356 | EU601005 | - | EU601084 | - | - | EU600962 | - |
| O. mirus | CHIMERA- Philippines: Mindanao; Unknown | U83752 | - | - | - | EU601126 | EU601057 | EU601020 | - | EU601099 | - | - | EU600978 | - |
| O. elegans | Unknown | - | - | - | AB842985 | EU123899 | - | - | - | - | - | - | - | - |
| O. mayottensis | Mayotte | - | - | EU601154 | - | EU601122 | EU601046 | EU601008 | - | EU601087 | - | - | EU600965 | - |
| O. madagascariensis | Madagascar | OM978893 | OM978911 | OM913489 | OM937295 | OM937315 | OM937357 | ON016166 | - | EU601082 | - | - | EU600960 | - |
| O. rutilus | Madagascar | - | - | EU601135 | - | EF198270 | EF198304 | EU600989 | - | EU601066 | - | - | EU600946 | - |
| O. capnodes | Comoros: Anjouan | - | - | EU601145 | - | EU601114 | EU601038 | EU601000 | - | EU601078 | - | - | EU600957 | - |
| O. insularis | Seychelles: Mahe | - | - | EU601128 | - | EU601101 | EU601022 | EU600983 | - | EU601059 | - | - | EU600940 | - |
| O. sunia | CHIMERA- China x 2; Thailand | OM978894 | OM978912 | OM913491 | ON016106 | OM937316 | OM937358 | ON016167 | - | EU601081 | EU348927 | - | EU600959 | - |
| O. socotranus | Socotra | - | - | - | - | - | KC138824 | KC138832 | - | KC138816 | - | - | KC138810 | - |
| O. pauliani | Comoros: Grande Comore | - | - | - | - | EU601125 | EU601058 | EU601021 | - | EU601100 | - | - | EU600979 | - |
| O. moheliensis | Comoros: Moheli | OM978892 | OM978910 | OM913490 | - | OM937317 | EU601045 | ON016168 | OM937328 | OM937335 | ON016117 | ON016129 | ON016134 | ON016152 |
| O. icterorhynchus holerythrus | CHIMERA- Cameroon: Efulan; DRC: Kivu | - | - | - | - | OM937318 | OM937359 | ON016169 | - | - | - | - | - | - |
| O. icterorhynchus icterorhynchus | Liberia: Lofa County | - | - | - | - | - | OM937360 | ON016170 | - | OM937332 | - | - | - | - |
| O. bakkamoena marathae | India: Wadi | - | - | - | - | - | OM937340 | - | - | - | - | - | - | - |
| O. lempiji | CHIMERA- Singapore: Indonesia (captive); Unknown | OM978888 | OM978903 | OM913481 | OM937290 | OM937296 | OM937341 | ON016153 | - | EU601076 | EU348922 | - | EU600981 | - |
| O. lettia | CHIMERA- Russia; China; Laos | - | - | EU601140 | GQ482285 | EU601109 | EU601033 | EU600996 | - | EU601073 | EU348923 | - | EU600953 | - |
| O. megalotis | CHIMERA- Philippines - Isabela: Luzon | - | - | EU601133 | JQ175645 | EU601105 | EU601027 | EU600988 | - | EU601064 | - | - | EU600944 | - |
| O. nigrorum | CHIMERA- Philippines: Panay; Unknown | U83755 | - | - | - | JN131497 | KF792802 | - | - | - | EU348924 | - | - | - |
| O. everetti | CHIMERA- Philippines: Mindanao; Unknown | U83754 | - | - | U83779 | JN131492 | JN131480 | - | - | - | - | - | - | - |
| O. semitorques | CHIMERA- Russia; Unknown | AY513588 | - | EU601142 | AB843645 | EU601111 | EU601035 | EU600998 | - | EU601075 | - | - | EU600955 | - |
| O. angelinae | Indonesia: Java | - | - | - | - | - | OM937342 | - | - | - | - | - | - | - |
| O. silvicola | Indonesia: Flores | - | - | - | - | OM937302 | - | - | - | - | - | - | - | - |
| O. spilocephalus vandewateri | Sumatra | - | - | - | - | OM937297 | OM937343 | - | - | - | - | - | - | - |
| O. spilocephalus vulpes | Malaysia: Perak | - | - | - | - | OM937298 | OM937344 | - | - | - | - | - | - | - |
| O. spilocephalus luciae | Borneo | - | - | - | - | OM937299 | - | - | - | - | - | - | - | - |
| O. spilocephalus spilocephalus | CHIMERA- China; Unknown | - | - | EU601147 | - | EU601116 | EU601040 | - | - | EU601080 | KJ456094 | - | EU600980 | - |
| O. spilocephalus hambroecki | Taiwan: Horisha | - | - | - | - | OM937300 | OM937345 | - | - | - | - | - | - | - |
| O. spilocephalus latouchi | CHIMERA- Laos; China | OM978889 | OM978904 | OM913482 | OM937291 | OM937301 | OM937346 | ON016154 | - | - | EU348926 | - | - | - |
| O. ireneae | Kenya | - | - | EU601144 | - | EU601113 | EU601037 | EU600999 | - | EU601077 | - | - | EU600956 | - |
| Bubo bubo | France | - | - | EU601137 | - | AJ003969 | EU601029 | EU600992 | - | EU601069 | - | - | EU600949 | - |
| Strix aluco | France | - | - | EU601138 | - | EU601107 | EU601030 | EU600993 | - | EU601070 | - | - | EU600950 | - |
Notes
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