Published December 31, 2020
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Table 2 in A phylogeny of species near Agrostis supporting the recognition of two new genera, Agrostula and Alpagrostis (Poaceae, Pooideae, Agrostidinae) from Europe
Authors/Creators
- 1. Department of Botany MRC- 166, National Museum of Natural History, Smithsonian Institution, Washington DC 20013 - 7012, USA
- 2. College of Biology and the Environment, Nanjing Forestry University, Long Pan Road No. 159, Nanjing, 210037, China
- 3. Department of Africa and Madagascar, Missouri Botanical Garden, St. Louis, Missouri 63110 - 2291, USA
- 4. Herbarium MA, Unidad de Herbarios, Real Jardin Botanico, Consejo Superior de Investigaciones Cientificas, 28014, Madrid, Spain
- 5. Department of Biodiversity and Conservation, Real Jardin Botanico, Consejo Superior de Investigaciones Cientificas, 28014, Madrid, Spain
Description
Table 2. Characteristics of rps16-trnK, rps16 intron, rpl32-trnL, and ITS, and parameters used in Bayesian analyses indicated by Akaike Information Criterion (AIC).
| rps16-trnK | rps16 intron | rpl32-trnL | Combined plastid data | ITS | Overall | |
| Total aligned characters | 738 | 845 | 904 | 2487 | 712 | 3199 |
| Number of sequences | 41 | 40 | 47 | 128 | 48 | 176 |
| Likelihood score (-ln L) | 1259.16 | 1449.21 | 1888.70 | 1989.55 | ||
| Number of substitution types | 6 | 6 | 6 | - | 6 | - |
| Model for among-sites rate variation | gamma | gamma | gamma | - | gamma | - |
| Substitution rates | ||||||
| rAC | 2.44683 | 2.33760 | 1.03926 | - | 0.78611 | - |
| rAG | 2.12801 | 1.84060 | 0.64852 | 2.03233 | ||
| rAT | 0.11415 | 0.31850 | 0.20833 | 1.27811 | ||
| rCG | 1.41016 | 0.78529 | 0.73967 | 0.31482 | ||
| rCT | 2.47892 | 2.54521 | 0.97480 | 5.07499 | ||
| rGT | 1.00000 | 1.00000 | 1.00000 | 1.00000 | ||
| Character state frequencies | ||||||
| fA | 0.28602 | 0.35597 | 0.36767 | - | 0.22141 | - |
| fC | 0.16385 | 0.15120 | 0.14893 | 0.29792 | ||
| fG | 0.16537 | 0.18750 | 0.13618 | 0.29123 | ||
| fT | 0.38477 | 0.30534 | 0.34722 | 0.18944 | ||
| Proportion of invariable sites | 0.37013 | 0.1041 | 0.36504 | - | 0.30563 | - |
| Substitution model | TVM+G | GTR+I+G | GTR+G | - | GTR+I+G | - |
| Gamma shape parameter (α) | 0.90138 | 0.45913 | 0.83500 | - | 0.38018 | - |
Notes
Published as part of Peterson, Paul M., Sylvester, Steven P., Romaschenko, Konstantin, Soreng, Robert J., Barbera, Patricia, Quintanar, Alejandro & Aedo, Carlos, 2020, A phylogeny of species near Agrostis supporting the recognition of two new genera, Agrostula and Alpagrostis (Poaceae, Pooideae, Agrostidinae) from Europe, pp. 57 in PhytoKeys 167 on page 57, DOI: 10.3897/phytokeys.167.55171
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- Is part of
- Journal article: 10.3897/phytokeys.167.55171 (DOI)
- Journal article: urn:lsid:plazi.org:pub:3C4F70F605B8522EA5A3AE455CAA7632 (LSID)
- Journal article: http://publication.plazi.org/id/3C4F70F605B8522EA5A3AE455CAA7632 (URL)
- Journal article: http://zenodo.org/record/null (URL)
- Journal article: 10.3897/phytokeys.167.55171 (DOI)