Published December 31, 2020
| Version v1
Dataset
Open
Table 3 in Revisiting the taxonomy of Dioclea and related genera (Leguminosae, Papilionoideae), with new generic circumscriptions
Authors/Creators
- 1. Programa de Pos-Graduacao em Botanica, Universidade Estadual de Feira de Santana, Av. Transnordestina s / n, Novo Horizonte, 44036 - 900, Feira de Santana, BA, Brazil
- 2. Programa de Pos-Graduacao em Botanica, Universidade Estadual de Feira de Santana, Av. Transnordestina s / n, Novo Horizonte, 44036 - 900, Feira de Santana, BA, Brazil & Departamento de Engenharia de Pesca e Ciencias Biologicas, Universidade do Estado de Santa Catarina, Rua Cel. Fernandes Martins 270, Progresso, 88790 - 000, Laguna, Santa Catarina, Brazil
Description
Table 3. Features of the DNA datasets used in this study, based on one of the most parsimonious trees from the combined parsimony analysis and nucleotide substitution models selected for Bayesian analyses. (bp = base pairs; CI = consistency index; RI = retention index; Best-fit model for the Bayesian analysis was selected by AIC in MrModeltest 2.3).
| DNA region | N | Aligned length (bp) | Number variable sites | Number Potentially parsimony informative sites | Number of changes/ variable sites | Fitch tree length | CI | RI | Best-fit model | ||
|---|---|---|---|---|---|---|---|---|---|---|---|
| ETS region | 55 | 439 | 277 | (63.10%) | 205 | (46.70%) | 2.40 | 666 | 0.62 | 0.82 | GTR+G |
| ITS region | 56 | 687 | 320 | (46.58%) | 239 | (34.79%) | 2.38 | 762 | 0.60 | 0.81 | mixed |
| ITS1 | 278 | 158 | (56.83%) | 118 | (42.45%) | 2.44 | 385 | 0.60 | 0.79 | SYM+G | |
| 5.8S | 164 | 13 | (7.93%) | 10 | (6.10%) | 1.15 | 15 | 0.87 | 0.94 | K80 | |
| ITS2 | 245 | 149 | (60.82%) | 111 | (45.31%) | 2.43 | 362 | 0.59 | 0.82 | SYM+G | |
| trnK introns | 40 | 407 | 76 | (18.67%) | 43 | (10.57%) | 1.29 | 98 | 0.85 | 0.90 | GTR+I+G |
| matK gene | 1539 | 244 | (15.85%) | 149 | (9.68%) | 1.25 | 306 | 0.83 | 0.86 | mixed | |
| matK (1st positions) | 513 | 71 | (13.84%) | 44 | (8.58%) | 1.23 | 87 | 0.85 | 0.87 | GTR+G | |
| matK (2st positions) | 513 | 64 | (12.48%) | 39 | (7.60%) | 1.16 | 74 | 0.88 | 0.93 | GTR | |
| matK (3st positions) | 513 | 109 | (21.25%) | 66 | (12.87%) | 1.33 | 145 | 0.8 | 0.8 | GTR+G | |
| Combined (all data) | 60 | 3072 | 917 | (29.85%) | 636 | (20.70%) | 1.73 | 1832 | 0.66 | 0.82 | mixed |
Notes
Published as part of Queiroz, Luciano Paganucci de & Snak, Cristiane, 2020, Revisiting the taxonomy of Dioclea and related genera (Leguminosae, Papilionoideae), with new generic circumscriptions, pp. 67 in PhytoKeys 164 on page 67, DOI: 10.3897/phytokeys.164.55441
Files
Files
(6.5 kB)
| Name | Size | Download all |
|---|---|---|
|
md5:45597d7cd4486763a493e3217d203410
|
6.5 kB | Download |
System files
(11.6 kB)
| Name | Size | Download all |
|---|---|---|
|
md5:b766918faafca7087b85a56e297f7cf1
|
11.6 kB | Download |
Additional details
Identifiers
Related works
- Is part of
- Journal article: 10.3897/phytokeys.164.55441 (DOI)
- Journal article: urn:lsid:plazi.org:pub:F8BB69882078557CB69041DA4DEAEA61 (LSID)
- Journal article: http://publication.plazi.org/id/F8BB69882078557CB69041DA4DEAEA61 (URL)
- Journal article: http://zenodo.org/record/null (URL)
- Journal article: 10.3897/phytokeys.164.55441 (DOI)