Published March 18, 2025 | Version v1

Food webs: edge lists and species names

Authors/Creators

  • 1. ROR icon IMT School for Advanced Studies Lucca

Description

Data consists of six food web networks. Four of them are in the form of edge lists (St. Marks, Florida Bay, Cypress dry season, Mangrove wet season), while the other two are in the form of Python scripts where we write the adjacency matrix link by link (Benguela, Coachella). We also provide the species names. In the case of Cypress dry season, we also provide the species biomasses.

 

References: 

Coachella: G. A. Polis, Complex trophic interactions in deserts: an empirical critique of food-web theory, The American Naturalist 138, 123 (1991).

Benguela: P. Yodzis, Local trophodynamics and the interaction of marine mammals and fisheries in the Benguela ecosystem, Journal of Animal Ecology 67, 635 (1998).

St. Marks: R. R. Christian and J. J. Luczkovich, Organizing and understanding a winter’s seagrass foodweb network through effective trophic levels, Ecological modelling 117, 99 (1999).

Florida Bay, Cypress Dry Season, Mangrove Wet Season: R. Ulanowicz, C. Bondavalli, and M. Egnotovich, Network Analysis of Trophic Dynamics in South Florida Ecosystem, fy 97: The Florida Bay Ecosystem, Annual Report to the United States Geological Service Biological Resources Division. Ref. No. [UMCES]CBL , 98 (1998).

The data of Florida Bay, Cypress Dry Season, Mangrove Wet Season were available at C. L. DuBois, E. S. Spiro, Z. Almquist, M. S. Handcock, D. Hunter, C. T. Butts, S. M. Goodreau, and M. Morris, netdata: A collection of network data (2003)., sourced from V. Batagelj and A. Mrvar, Pajek datasets (2006).

Files

Benguela_Species.txt

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