Published March 13, 2025 | Version v1

Novel Integrated Online DPPH-Assisted Multimodal Dereplication Workflow for Identifying Antioxidant Compounds in Complex Mixtures and its Application to a Supercritical CO₂ Extract of Makwaen Pepper By-product

  • 1. ROR icon Institut de Chimie Moléculaire de Reims
  • 2. ROR icon Agro-Biotechnologies Industrielles

Description

The identification of bioactive compounds in complex natural extracts remains a major challenge, particularly in the context of the sustainable valorization of by-products. In this study, an integrated dereplication strategy combining online DPPH-assisted screening, HRMS/MS, and 13C NMR-based chemical profiling was developed to identify antioxidant compounds in a supercritical CO₂ extract of Makwaen pepper (Zanthoxylum myriacanthum) by-product. A comprehensive offline CPC × HPLC coupling was employed to fractionate the extract, enhancing sensitivity and facilitating structure elucidation. The CATHEDRAL annotation tool was used to classify compounds based on annotation confidence levels, integrating data from Sirius, NAP, FBMN, and the CaraMel 13C NMR workflow. A total of 50 active compounds were identified, including flavonoids, caffeic and quinic acid esters, phloroglucinols, and lignans. This workflow provides a rapid and robust approach for dereplicating antioxidants in natural extracts, supporting the development of sustainable bioactive ingredients for cosmetic applications.

Notes

NMR.zip: NMR raw files

MS.zip: MS files converted to open format

MZmine.zip: Batch file and export files from MZmine data processing

Cytoscape.zip: .cys file from Cytoscape for molecular network visualization

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