Supplementary Data: Identification of hematopoietic cell state markers in acute leukemia using explainable machine learning

Supplementary Data for "Identification of hematopoietic cell state markers in acute leukemia using explainable machine learning" 

File Description

• IsoMarker Output.zip: Output of IsoMarker applied to integrated AML pseudo-bulk RNA-seq atlas.
• aml_raw_expression.csv.zip: Raw expression counts of AML pseudo-bulk RNA-seq atlas, stratified by donor and cell state.
• aml_raw_expression.csv.zip: VST-normalized expression counts of AML pseudo-bulk RNA-seq atlas, stratified by donor and cell state.
• aml_atlas_metadata.csv.zip: Metadata of AML pseudo-bulk RNA-seq atlas.
• AML_Atlas.h5ad: Full AML pseudo-bulk RNA-seq atlas in H5AD format.
• AML_Atlas_LeukemiavsHealthy.h5ad: AML pseudo-bulk RNA-seq atlas with Leukemia and Healthy annotations in H5AD format.