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Published July 16, 2018 | Version v8.1.3
Software Open

SysBioChalmers/yeast-GEM: yeast 8.1.3

Description

  • Features:
    • Added SBO terms for all metabolites and reactions, based on an automatic script now part of saveYeastModel.m (PR #132).
    • increaseVersion.m now avoids conflicts between devel and master by erroring before releasing and guiding the admin to change first devel (PR #133).
    • Website now available in gh-pages branch: http://sysbiochalmers.github.io/yeast-GEM/
  • Fixes:
    • Standardize naming of pseudo-metabolites "lipid backbone" & "lipid chain" (PR #130).
  • Chores:
    • Updated COBRA, which swapped around the order of the bqbiol:is and bqbiol:isDescribedByqualifiers in the .xml file (PR #131).

Files

yeast-GEM-v8.1.3.zip

Files (5.4 MB)

Name Size
md5:ecacaba5de865497dad1f73ae1513d23
5.4 MB Preview Download

Additional details

Related works

Is supplement to
https://github.com/SysBioChalmers/yeast-GEM/tree/v8.1.3 (URL)

Funding

European Commission
DD-DeCaF - Bioinformatics Services for Data-Driven Design of Cell Factories and Communities 686070