Published March 1, 2025 | Version v1

Compartmentalization reduces conflict in multi-partner plant-insect symbioses

  • 1. ROR icon Durham University
  • 2. ROR icon Washington University in St. Louis
  • 3. LMU Munich

Description

The submission contains the following files:

·  Dataset_Raw_15N_Fig_1A.csv

Raw 15N isotope data used for Figure 1A.

 

·  Dataset_Mean_SE_15N_Fig_1A.csv

Summary statistics (mean and standard error) of 15N isotope data for Figure 1A.

 

·  Fig_1A_R_code.R

R script for processing and visualizing 15N isotope data for Figure 1A, relying on Dataset_Mean_SE_15N_Fig_1A.csv.

 

·  Dataset_Raw_Fig_1C.csv

Raw 15N dataset used in Figure 1C of the study.

 

·  Dataset_Raw_Fig_1E.csv

Raw 15N dataset supporting the analysis in Figure 1E.

 

·  Dataset_Raw_Fig_1F.csv

Raw 15N dataset underlying Figure 1F.

 

·  15N_isotope_data_coforaging.csv

Raw 15N nitrogen isotope data related to co-foraging behavior in the study, shown in Fig. S15.

 

·  C_polynesicus_C_sadinus_conflict_dataset.csv

Agression dataset used for the survival analysis examining conflict dynamics between C. polynesicus and C. sadinus.

 

·  C_polynesicus_P_wilsoni_conflict_dataset.csv

Agression dataset used for the survival analysis examining conflict dynamics between C. polynesicus and P. wilsoni.

 

·  Survival_analysis_R_code.R

R script performing survival analysis on conflict datasets, relying on C_polynesicus_C_sadinus_conflict_dataset.csv and C_polynesicus_P_wilsoni_conflict_dataset.csv.

 

·  Ant_species_domatia_size.csv

Dataset of ant species identify and number inside Squamellaria tenuiflora, used in Fig. 2E and F and Fig. S4.

 

·  Regression_model_fitting_domatium_size_Ant_species.R

R script for regression modeling of domatia size based on ant species data shown in Fig. 2E, relying on Ant_species_domatia_size.csv.

 

·  Logistic_model_domatium_size_ant_species.R

R script for logistic modeling of domatia size in relation to ant species, shown in Fig. 2F, relying on Ant_species_domatia_size.csv.

 

·  Mathematical_model_Fig_5_compartments.R

R script implementing the mathematical model shown in in Fig. 5, and described in detail in the Materials and Methods, Supplementary Materials, section ‘Testing if compartmentalization stabilizes multi-species mutualism across time via model-ling the optimal domatium compartment number’.

 

Files

15N_isotope_data_coforaging.csv

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Additional details

Funding

NERC Environmental Bioinformatics Centre
The evolution of major transitions in mutualistic dependence NE/S014470/3
Engineering and Physical Sciences Research Council
BREAKDOWN: The regulation of breakdown of cooperation among species EP/X026868/1

Dates

Submitted
2025-03-01
Dataset and scripts