Published 2025 | Version v2

StringPPI_ dataset with protbert embedding

Description

Value Count of the dataset (further filtering is needed)

Updated Confidence Level Distribution: confidence_level Medium Confidence 484468 High Confidence 95647 Highest Confidence 69470

protein1                     object
protein2                     object
fusion                      float64
cooccurence                 float64
homology                    float64
coexpression                float64
experiments                 float64
database                    float64
textmining                  float64
combined_score              float64
confidence_level             object
confidence_level_encoded      int64
dtype: object

Embeddings are processed using protbert 

Matrix of dataset: 843262 rows × 12 columns

Files

new_dataset.csv

Files (203.0 MB)

Name Size Download all
md5:26743e8a0892dd08d65d2812c4bfad5e
121.1 MB Preview Download
md5:37007c0336cb6dd9dd3461c971f7a650
81.8 MB Download

Additional details

Software

Programming language
Python