Published 2025 | Version v2

Data and code for "Delineating SARS-CoV-2 spike protein and antibodies interaction interfaces via siamese neural networks: a geometric and image-based analysis"

  • 1. EDMO icon University of Alberta

Description

This archive contains the data and scripts used to (i) build homology-aware train/val/test splits at CDR-H3 level, (ii) render interface depth-map images (with optional augmentations) and compute geometric descriptors, and (iii) train/evaluate a cosine-contrastive Siamese CNN (two towers + fusion module). 

Please refer to 'README.txt' for details on the code. 

 

Files

data.zip

Files (411.8 MB)

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Additional details

Dates

Submitted
2025-02

Software

Programming language
Python