Published January 10, 2025 | Version v1

Images accompanying the paper "Enabling high-throughput quantitative wood anatomy through a dedicated pipeline"

Description

Images of increment cores acquired with the Gigapixel Woodbot.

Software for building your own Gigapixel Woodbot can be found on https://doi.org/10.5281/zenodo.14637832.

Releases of software for analysis of the images can be found on https://doi.org/10.5281/zenodo.14637855.

The training datasets and trained YOLOv8 model needed to run the analysis, can be found on https://doi.org/10.5281/zenodo.14604996

The full images of the disks (see paper for more details) can be found on https://doi.org/10.6019/S-BIAD1574

This is part of an entire sample preparation, imaging and analysis pipeline available in the paper "Enabling high-throughput quantitative wood anatomy through a dedicated pipeline" by Van den Bulcke and co-authors: https://doi.org/10.1186/s13007-025-01330-7.

Cite our paper when using these data.

Files

Core_image_MF_4Zstitched-1.ome.tif

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Additional details

Related works

Is derived from
Software: 10.5281/zenodo.14637832 (DOI)
Is referenced by
Journal article: 10.1186/s13007-025-01330-7 (DOI)
Is required by
Software: 10.5281/zenodo.14637855 (DOI)
Is supplement to
Model: 10.5281/zenodo.14604996 (DOI)
Dataset: 10.6019/S-BIAD1574 (DOI)

Funding

Ghent University
BOF Starting Grant BOFSTG2018000701
Research Foundation - Flanders
ACTREAL G019521N
Research Foundation - Flanders
XyloDynaCT G009720N
Belgian Federal Science Policy Office
SmartWoodID B2/202/P2/SmartWoodID
Belgian Federal Science Policy Office
ENFORCE RT/22/ENFORCE