Published January 6, 2025 | Version v2

MORFEEdb, a comprehensive catalog of SNVs affecting upstream ORFs in human 5'UTRs

  • 1. ROR icon Bordeaux Population Health

Description

MORFEEdb is a  database containing all possible single nucleotide variants (SNVs) creating or altering upORFs
(upORF-SNVs). 

MORFEEdb was obtained by first performing  a mutational saturation of the 5’UTR of 55 304 transcripts from ~17 000 coding genes where each position in the 5’UTR was in silico mutated with
the 3 alternative nucleotides. The resulting generated VCF files for all transcripts were then annotated with the
MORFEE program as described in doi: https://doi.org/10.1101/2024.10.07.616631

The vcf  files resulting from the whole genome 5'UTR mutational saturation are included in the results_per_transcripts.zip archive

Files

results_per_transcript.zip

Files (8.7 GB)

Name Size
md5:974c0641c4754600f0b67319924616bf
1.3 GB Download
md5:fad483e33ac382f1ffb423d22e4895b1
7.3 GB Preview Download

Additional details

Related works

Is supplement to
Publication: 10.1101/2024.10.07.616631 (DOI)

Dates

Available
2025-01