Published December 31, 2024 | Version v1
Dataset Open

Snapshot of PDF links for taxonomic papers in BioNames

  • 1. ROR icon University of Glasgow

Description

This dataset is a list of all URLs for PDFs in the database BioNames, which links publications of new taxonomic names for animals to persistent identifiers and PDFs for those publications. The database is continually edited and hence PDF links that no longer work or have changed (e.g., from HTTP to HTTPS) may be overwritten. Because no longer functioning PDF links may be useful measures of link rot I have created this snapshot of PDF links in the current version of BioNames This snapshot was made on the date the data was uploaded to Zenodo. It may be updated in future versions.

The dataset was generated from a local MySQL database using the query:

SELECT DISTINCT 
IFNULL(sici, '') AS sici,  
IFNULL(title, '') AS title,  
IFNULL(journal, '') AS journal, 
IFNULL(volume, '') AS volume,  
IFNULL(spage, '') AS spage,  
IFNULL(epage, '') AS epage,  
IFNULL(year, '') AS year,  
IFNULL(doi, '') AS doi,  
IFNULL(handle, '') AS handle,  
IFNULL(url, '') AS url, 
pdf,
updated
FROM names 
WHERE pdf IS NOT NULL 
ORDER BY journal, year;

The data is a TSV file with the following column headings:
 
Column name Column contents
sici MD5 hash of bibliographic metadata, used as unique identifier within BioNames.
title Title of publication
journal Journal publication appears in
volume Volume
spage Starting page
epage Ending page
year Year of publication
doi DOI https://doi.org
handle Handle https://hdl.handle.net
url Link to publication web page
pdf Link to PDF
updated Date and time the bibliographic record was last updated (note that this is the last time any information on this record was updated, not necessarily the date the PDF link was added).

Note that cells may be empty if data for that cell is not known, or not relevant (for example, if publication is not a journal article then "journal" will be empty).

Files

Files (47.1 MB)

Name Size Download all
md5:fe4f03218af8acb10b27fc7ab2cd4374
47.1 MB Download

Additional details

Related works

Is documented by
Publication: 10.7717/peerj.190 (DOI)

References