Published December 5, 2024
| Version v1.0
Dataset
Open
PhASETraCE (v1.0) Dataset: Multi-scale phylodynamic modelling of rapid punctuated pathogen evolution
Authors/Creators
- 1. The University of Sydney School of Computer Science
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2.
The University of Sydney
Description
Paper describing scenarios which generated this dataset:
Q. D. Nguyen, S. L. Chang, C. J. E. Suster, R. J. Rockett, V. Sintchenko, T. C. Sorrell, M. Prokopenko, Multi-scale phylodynamic modelling of rapid punctuated pathogen evolution, PLOS Computational Biology, 21(7): e1013295, 2025 (also arXiv: https://arxiv.org/abs/2412.03896, 2024).
The PhASETraCE (v1.0) source code is released on Zenodo: https://zenodo.org/records/14279369.
Notes
This work was supported by the Australian Research Council grants DP220101688 (MP, SLC and QDN), as well as the University of Sydney's Digital Science Initiative (DSI) Research Pilot Project funding scheme.