Endosymbiosis-independent evolution of starch as storage material of ciliates

GWD_PWD_complete.fasta - non-aligned phylogenetic dataset

GWD_PWD.fasta.L_INS_i - full aligment of GWD proteins prepared by MAFFT

GWD_PWD.fasta.L_INS_i.gappy - trimmed aligment, directly used for phylogenetic analysis preparation

GWD_PWD.nwk - the phylogenetic tree of GWD and PWD, as shown on figure S3

GWD_PWD_ciliates_reference.txt - representative ciliate GWD and PWD sequences, referenced in Table S2

GT5_ciliates_reference.txt - representative ciliate starch/glycogen synthase sequences, referenced in Table S6

GH13_ciliates_reference.txt - representative ciliate branching enzyme sequences, referenced in Table S7

GH13_GH133_ciliates_reference.txt - representative ciliate indirect debranching enzyme sequences, referenced in Table S8

GT35_ciliates_reference.txt - representative ciliate phosphorylase sequences, referenced in Table S9 

GWD_PWD_colponemids_Goniomonas_Pygsuia_reference.txt - representative GWD and PWD sequences of Colponemids, Goniomonas and Pygsuia, referenced in Table S10