Published December 3, 2024 | Version v1

Human head models and populational framework for simulating brain stimulations: subject conversion

  • 1. ROR icon University of Groningen
  • 2. ROR icon University of Minnesota System
  • 3. ROR icon TU Wien
  • 4. Northwestern University

Description

We share an organized computational model data collection for noninvasive brain stimulation (NIBS) modeling. This dataset includes a subset of the collection's 100 preprocessed, quality-assured, realistic head models based on imaging data from the Human Connectome Project (HCP) s1200 release (Van Essen et al., 2012). We provide verified finite-element meshes, underlying anatomical images, tissue segmentations, standard space co-registrations, quality metrics, and lead-field matrices. We suggest individual tissue conductivity values for each head model from a range of biologically plausible values (McCann et al., 2019). Additionally, we provide straightforward computer code for several use cases of the current dataset. 

 

  1. McCann, H., Pisano, G., & Beltrachini, L. (2019). Variation in Reported Human Head Tissue Electrical Conductivity Values. Brain Topography, 32(5), 825–858. https://doi.org/10.1007/s10548-019-00710-2

  2. Van Essen, D. C., Ugurbil, K., Auerbach, E., Barch, D., Behrens, T. E. J., Bucholz, R., Chang, A., Chen, L., Corbetta, M., Curtiss, S. W., Della Penna, S., Feinberg, D., Glasser, M. F., Harel, N., Heath, A. C., Larson-Prior, L., Marcus, D., Michalareas, G., Moeller, S., … WU-Minn HCP Consortium. (2012). The Human Connectome Project: A data acquisition perspective. NeuroImage, 62(4), 2222–2231. https://doi.org/10.1016/j.neuroimage.2012.02.018

 

This dataset is split into 6 parts, you are currently on part 1. All parts are linked below:

Dataset_1: https://zenodo.org/records/13259679

Dataset_2: https://zenodo.org/records/13259747

Dataset_3: https://zenodo.org/records/13259943

Dataset_4: https://zenodo.org/records/13260068

Dataset_5: https://zenodo.org/records/13259599

Dataset_6: https://zenodo.org/records/13260208

 

This is an optional utils folder available for download to support the automatic conversion of head models from SimNIBS 3 to SimNIBS 4. 

Files

README_utils_simnib4.txt

Files (30.3 kB)

Name Size Download all
md5:ee205e07d9aff987fd608fc21c972bf6
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md5:a24a9faf31e5c428ec30b013bc82f920
27.1 kB Download

Additional details

Software

Programming language
MATLAB
Development Status
Active