Published September 21, 2018 | Version v1

Simulation CER160_9_POPC_512_TM3_10_5up_5down_NaCl_150mM_310K (rep5)

Authors/Creators

  • 1. Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences

Description

Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino Acid Transporter Interaction

Year publication: 2018

DOI publication: 10.1021/acscentsci.7b00582

Description: Simulation POPC membrane containing ten LAPTM4B-TM3 peptides and 9 ceramide (CER160) originally in the water phase using charmm36 at 310K.

MD engine: 2018

Force field: charmm36

Temperature: 310 K

Pressure: 1 bar

Simulation time: 318 ns

Saving frequency: 100 ps

Molecular content:

TM3            10
POPC        512
CER160       9
SOL      34248
NA            102
CL              92

Additional information:
    * Membrane containing LAPTM4B TM3 peptides.

Files

Files (2.1 GB)

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md5:1c49ee23c66b938d7d5a9e72e0ca05e1
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md5:7ce37173a710b25b27b9e0dd59b9c374
4.3 MB Download
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2.1 MB Download
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2.3 MB Download
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md5:e4338928dc2c93cd25f24a30b4cd30d1
6.2 MB Download
md5:d755daa48d03c7f1aabe00605f83281f
701 Bytes Download
md5:1c854ac58180d7c257741e46e5759170
5.3 MB Download
md5:d90986ff2e993d5025ef8b8b4865ff9d
2.1 GB Download
md5:9aeb6848bed943b1f0e75e091766919c
12.3 kB Download
md5:1a524bbf7b8016ea195ef30f463c8aca
4.3 MB Download
md5:d490a91e597685c90cb931220947c671
12.3 kB Download
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34.4 kB Download

Additional details

Related works

Is supplement to
10.1021/acscentsci.7b00582 (DOI)