Published September 21, 2018
| Version v1
Dataset
Open
Simulation CER160_9_POPC_512_TM3_10_5up_5down_NaCl_150mM_310K (rep4)
Authors/Creators
- 1. Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
Description
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino Acid Transporter Interaction
Year publication: 2018
DOI publication: 10.1021/acscentsci.7b00582
Description: Simulation POPC membrane containing ten LAPTM4B-TM3 peptides and 9 ceramide (CER160) originally in the water phase using charmm36 at 310K.
MD engine: 2018
Force field: charmm36
Temperature: 310 K
Pressure: 1 bar
Simulation time: 648 ns
Saving frequency: 100 ps
Molecular content:
TM3 10
POPC 512
CER160 9
SOL 34248
NA 102
CL 92
Additional information:
* Membrane containing LAPTM4B TM3 peptides.
Files
Files
(4.3 GB)
| Name | Size | |
|---|---|---|
|
md5:1c49ee23c66b938d7d5a9e72e0ca05e1
|
8.0 MB | Download |
|
md5:bee07d90428c622ef417be09d2b1dfbe
|
4.3 MB | Download |
|
md5:7e686020dbc4462e1ecd84f93395ddaf
|
4.2 MB | Download |
|
md5:0bf8c5042ae9e3eb3aa1ceabfd8c4487
|
1.1 kB | Download |
|
md5:e4338928dc2c93cd25f24a30b4cd30d1
|
6.2 MB | Download |
|
md5:d755daa48d03c7f1aabe00605f83281f
|
701 Bytes | Download |
|
md5:3817a2439d3d5a8b8803e56a5b199957
|
5.3 MB | Download |
|
md5:9032c8282610e1836e53bbfd961e4f51
|
4.3 GB | Download |
|
md5:cb59e12abbc8cdd466920587e037a24f
|
12.3 kB | Download |
|
md5:e61792315dc5a46c3dddd674130fcdf0
|
4.3 MB | Download |
|
md5:d490a91e597685c90cb931220947c671
|
12.3 kB | Download |
|
md5:3d1c1e4b7a6c6a868b8870bb04e7b37d
|
619.1 kB | Download |
|
md5:57a082aaa7bf8112967c87fc123e3da8
|
34.4 kB | Download |
Additional details
Related works
- Is supplement to
- 10.1021/acscentsci.7b00582 (DOI)