Published September 21, 2018
| Version v1
Dataset
Open
Simulation CER160_9_POPC_512_TM3_10_5up_5down_NaCl_150mM_310K (rep1)
Authors/Creators
- 1. Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
Description
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino Acid Transporter Interaction
Year publication: 2018
DOI publication: 10.1021/acscentsci.7b00582
Description: Simulation POPC membrane containing ten LAPTM4B-TM3 peptides and 9 ceramide (CER160) originally in the water phase using charmm36 at 310K.
MD engine: 2016.2-dev-20170105-4feb0be
Force field: charmm36
Temperature: 310 K
Pressure: 1 bar
Simulation time: 2134 ns
Saving frequency: 100 ps
Molecular content:
TM3 10
POPC 512
CER160 9
SOL 34248
NA 102
CL 92
Additional information:
* Membrane containing LAPTM4B TM3 peptides.
Files
Files
(14.2 GB)
| Name | Size | |
|---|---|---|
|
md5:b13b8c1f5e589eb4f324e3871a3788f7
|
12.2 MB | Download |
|
md5:5f37f75b8df9d5280e2716f680916ba0
|
4.3 MB | Download |
|
md5:ab3c4f0b095944d6e280dff3bf57c5e1
|
13.6 MB | Download |
|
md5:b383d87fd3da053e4f1ba1123a8d6ce0
|
14.5 MB | Download |
|
md5:0bf8c5042ae9e3eb3aa1ceabfd8c4487
|
1.1 kB | Download |
|
md5:e4338928dc2c93cd25f24a30b4cd30d1
|
6.2 MB | Download |
|
md5:661831997fcbedcc8de6c8ce69d35cdc
|
659 Bytes | Download |
|
md5:15184f5a0782376355feeeabadf412e2
|
5.2 MB | Download |
|
md5:b08ab9c4ca7ab145344b07740132140e
|
14.1 GB | Download |
|
md5:7e76c637a05d3fe06c883080b126e4dd
|
12.4 kB | Download |
|
md5:7597c3c9f17b80bf619f09ab1260eb89
|
4.3 MB | Download |
|
md5:5e1011517ca2e4797a583a901c0b3d1d
|
34.4 kB | Download |
Additional details
Related works
- Is supplement to
- 10.1021/acscentsci.7b00582 (DOI)