Published September 14, 2018
| Version 1.0.2-called
Dataset
Open
MinION 1D² Reads From Mus musculus GL261 Cell Lines
Authors/Creators
- 1. Malaghan Institute of Medical Research
Description
Called FASTQ and raw FAST5 MinION cDNA reads (1D²) from a murine GL261 neuroblastoma cell line, cultured at the Malaghan Institute of Medical Research, sequenced on a R9.5 flow cell in August 2017 using the LSK309 1D² kit for ligating ONT adapters to cDNA generated using strand-switching primers.
The called reads for the entire sequencing run are available:
- called_reads_1Dsq_Olivier_GL261_cDNA_2017-Aug-04.tar.gz -- called reads from both/all runs (1D²-corrected fastq files only).
- called_reads_uncorrected_Olivier_GL261_cDNA_2017-Aug-04.tar.gz -- uncorrected reads from both/all runs.
- metadata_called_reads_Olivier_GL261_cDNA_2017-Aug-04.tar.gz -- metadata associated with all called sequences (e.g. sequencing_summary.txt)
This dataset only includes a subset of the total reads as raw signal / FAST5 files:
- Actb_GL261_cDNA_2017-Aug-04_1D2.tar -- reads from one run that mapped (in whole or in part) to a mouse beta-actin transcript [ENSMUST00000100497.10].
- Ubb_GL261_cDNA_2017-Aug-04_1D2.tar -- reads from one run that mapped (in whole or in part) to a mouse ubiquitin transcript [ENSMUST00000019649.3].