Published September 14, 2018 | Version 1.0.2-called

MinION 1D² Reads From Mus musculus GL261 Cell Lines

  • 1. Malaghan Institute of Medical Research

Description

Called FASTQ and raw FAST5 MinION cDNA reads (1D²) from a murine GL261 neuroblastoma cell line, cultured at the Malaghan Institute of Medical Research, sequenced on a R9.5 flow cell in August 2017 using the LSK309 1D² kit for ligating ONT adapters to cDNA generated using strand-switching primers.

The called reads for the entire sequencing run are available:

  • called_reads_1Dsq_Olivier_GL261_cDNA_2017-Aug-04.tar.gz -- called reads from both/all runs (1D²-corrected fastq files only).
  • called_reads_uncorrected_Olivier_GL261_cDNA_2017-Aug-04.tar.gz -- uncorrected reads from both/all runs.
  • metadata_called_reads_Olivier_GL261_cDNA_2017-Aug-04.tar.gz -- metadata associated with all called sequences (e.g. sequencing_summary.txt)

This dataset only includes a subset of the total reads as raw signal / FAST5 files:

  • Actb_GL261_cDNA_2017-Aug-04_1D2.tar -- reads from one run that mapped (in whole or in part) to a mouse beta-actin transcript [ENSMUST00000100497.10].
  • Ubb_GL261_cDNA_2017-Aug-04_1D2.tar -- reads from one run that mapped (in whole or in part) to a mouse ubiquitin transcript [ENSMUST00000019649.3].

Files

Files (3.6 GB)

Name Size
md5:872d2cf183004f9af12ad0ed1ecd2555
85.4 MB Download
md5:ed8ec286d37a88ac923345de9213e923
492.9 MB Download
md5:01d44649ddd46fd0a4ed690302d6df20
2.7 GB Download
md5:ea739f11d41451fa755fc223122e12e1
235.0 MB Download
md5:5772cb43b99b4234cbb54471792d736c
157.5 MB Download